miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33396_bta-mir-490:mirbase
Length = 127
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 79
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 80 tggaggactccatgctgttga 100
>32179_mmu-mir-490:mirbase
Length = 84
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagatatacaccaacc 63
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 64 tggaggactccatgctgttga 84
>32180_mmu-mir-490:mirbase
Length = 84
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagatatacaccaacc 63
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 64 tggaggactccatgctgttga 84
>32934_rno-mir-490:mirbase
Length = 84
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagatatacaccaacc 63
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 64 tggaggactccatgctgttga 84
>27928_mml-mir-490:mirbase
Length = 128
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 21 aaagttcattgttcgacaccatggatctccaggtgggtcaagtttagagatgcaccaacc 80
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 81 tggaggactccatgctgttga 101
>27929_mml-mir-490:mirbase
Length = 128
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 21 aaagttcattgttcgacaccatggatctccaggtgggtcaagtttagagatgcaccaacc 80
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 81 tggaggactccatgctgttga 101
>28679_hsa-mir-490:mirbase
Length = 128
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 21 aaagttcattgttcgacaccatggatctccaggtgggtcaagtttagagatgcaccaacc 80
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 81 tggaggactccatgctgttga 101
>28680_hsa-mir-490:mirbase
Length = 128
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 21 aaagttcattgttcgacaccatggatctccaggtgggtcaagtttagagatgcaccaacc 80
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 81 tggaggactccatgctgttga 101
>30394_ptr-mir-490:mirbase
Length = 127
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 20 aaagttcattgttcgacaccatggatctccaggtgggtcaagtttagagatgcaccaacc 79
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 80 tggaggactccatgctgttga 100
>31027_ppy-mir-490:mirbase
Length = 128
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 21 aaagttcattgttcgacaccatggatctccaggtgggtcaagtttagagatgcaccaacc 80
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 81 tggaggactccatgctgttga 101
>31028_ppy-mir-490:mirbase
Length = 128
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 21 aaagttcattgttcgacaccatggatctccaggtgggtcaagtttagagatgcaccaacc 80
Query: 61 tggaggactccatgctgttga 81
|||||||||||||||||||||
Sbjct: 81 tggaggactccatgctgttga 101
>27196_eca-mir-490:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 13 tcgacaccatggatctccaggtgggtcacgtttagagatacaccaacctggaggactcca 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgacaccatggatctccaggtgggtcacgtttagagatacaccaacctggaggactcca 60
Query: 73 tgctgttga 81
|||||||||
Sbjct: 61 tgctgttga 69
>27197_eca-mir-490:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 13 tcgacaccatggatctccaggtgggtcacgtttagagatacaccaacctggaggactcca 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgacaccatggatctccaggtgggtcacgtttagagatacaccaacctggaggactcca 60
Query: 73 tgctgttga 81
|||||||||
Sbjct: 61 tgctgttga 69
>34108_ssc-mir-490:mirbase
Length = 79
Score = 121 bits (61), Expect = 8e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 9 ttgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacctggaggac 68
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ttgttcgacaccatggatccccaggtgggtcacgtttcaagatacaccaacctggaggac 60
Query: 69 tccatgctgttga 81
|||||||||||||
Sbjct: 61 tccatgctgttga 73
>26041_gga-mir-490:mirbase
Length = 93
Score = 117 bits (59), Expect = 1e-27
Identities = 77/82 (93%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 2 aagttcattgttcgacaccatggatctccaggtgggtcacgttta--gagatacaccaac 59
|||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||
Sbjct: 1 aagttcatggttcgacaccatggatctccaggtgggtcaagattatagagatacaccaac 60
Query: 60 ctggaggactccatgctgttga 81
||||||||||||||||||||||
Sbjct: 61 ctggaggactccatgctgttga 82
>26540_tgu-mir-490-1:mirbase
Length = 93
Score = 101 bits (51), Expect = 7e-23
Identities = 72/78 (92%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 3 agttcattgttcgacaccatggatctccaggtgggtcacgtt--tagagatacaccaacc 60
||||||| ||||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 6 agttcatgcttcgacaccatggatctccaggtgggtcaagataatagagatacaccaacc 65
Query: 61 tggaggactccatgctgt 78
||||||||||||||||||
Sbjct: 66 tggaggactccatgctgt 83
>26541_tgu-mir-490-2:mirbase
Length = 93
Score = 101 bits (51), Expect = 7e-23
Identities = 72/78 (92%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 3 agttcattgttcgacaccatggatctccaggtgggtcacgttta--gagatacaccaacc 60
||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||
Sbjct: 6 agttcatgcttcgacaccatggatctccaggtgggtcaagattatagagatacaccaacc 65
Query: 61 tggaggactccatgctgt 78
||||||||||||||||||
Sbjct: 66 tggaggactccatgctgt 83
>31560_oan-mir-490:mirbase
Length = 124
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 aaagttcattgttcgacaccatggatctccaggtgggtcacgtttagagatacaccaacc 60
|||||||| ||||||| |||||||||||||||||||||| | ||||||| ||||||||
Sbjct: 12 aaagttcacggttcgacgccatggatctccaggtgggtcaaggttagagacgcaccaacc 71
Query: 61 tggaggactccatgctgt 78
||||||||||||||||||
Sbjct: 72 tggaggactccatgctgt 89
