miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00793;mir-497;ABRO01159172.1/3932-3821 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 112
Score = 105 bits (53), Expect = 7e-23
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 1 cagcagcacactgtggtttgtacggtactgtggccacgtccagaccacactgtggtgtta 60
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 24 cagcagcacactgtggtttgtacggcactgtggccacgtccaaaccacactgtggtgtta 83
Query: 61 g 61
|
Sbjct: 84 g 84
>RF00793;mir-497;ABRQ01154875.1/189-78 9813:Procavia capensis
(cape rock hyrax)
Length = 112
Score = 97.6 bits (49), Expect = 2e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 1 cagcagcacactgtggtttgtacggtactgtggccacgtccagaccacactgtggtgtta 60
||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||
Sbjct: 24 cagcagcacactgtggtttgtacggcattgtggccacgtccaaaccacactgtggtgtta 83
Query: 61 g 61
|
Sbjct: 84 g 84
>RF00793;mir-497;AAFR03049810.1/89806-89695 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 112
Score = 65.9 bits (33), Expect = 6e-11
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 1 cagcagcacactgtggtttgtacggtactgtggccacgtccagaccacactgtggtgtta 60
||||||||||||||||||||| | || | |||||| ||||| |||||||||||||||||
Sbjct: 24 cagcagcacactgtggtttgttcagtgttatggccaagtccaaaccacactgtggtgtta 83
Query: 61 g 61
|
Sbjct: 84 g 84
