miRNEST 2.0, an integrative microRNA resource :: BLAST
>27225_eca-mir-539:mirbase
Length = 78
Score = 119 bits (60), Expect = 3e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
||||||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttgctgtgttcgctttatttgtgatgaatcatacaaggac 61
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 62 aatttctttttgagta 77
>27989_mml-mir-539:mirbase
Length = 78
Score = 119 bits (60), Expect = 3e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
|||||||||||||||||||||||||||||||||| | ||| ||| |||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 61
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 62 aatttctttttgagta 77
>28787_hsa-mir-539:mirbase
Length = 78
Score = 119 bits (60), Expect = 3e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
|||||||||||||||||||||||||||||||||| | ||| ||| |||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 61
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 62 aatttctttttgagta 77
>30466_ptr-mir-539:mirbase
Length = 77
Score = 119 bits (60), Expect = 3e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
|||||||||||||||||||||||||||||||||| | ||| ||| |||||||||||||||
Sbjct: 1 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 60
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 61 aatttctttttgagta 76
>31126_ppy-mir-539:mirbase
Length = 78
Score = 119 bits (60), Expect = 3e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
|||||||||||||||||||||||||||||||||| | ||| ||| |||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttggtgtgttcgctttatttatgatgaatcatacaaggac 61
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 62 aatttctttttgagta 77
>33411_bta-mir-539:mirbase
Length = 78
Score = 111 bits (56), Expect = 7e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
|||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||
Sbjct: 2 tacttgaggagaaattatccttggtgtgttcgctttatttgggatgaatcatacaaggac 61
Query: 61 aatttctttttgagta 76
||||||||| ||||||
Sbjct: 62 aatttctttctgagta 77
>33864_oar-mir-539:mirbase
Length = 110
Score = 111 bits (56), Expect = 7e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
||||||||||||||||||||||||||||||| || | |||| || |||||||||||||||
Sbjct: 16 tacttgaggagaaattatccttggtgtgttcactttatttgggatgaatcatacaaggac 75
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 76 aatttctttttgagta 91
>33865_oar-mir-539:mirbase
Length = 110
Score = 111 bits (56), Expect = 7e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
||||||||||||||||||||||||||||||| || | |||| || |||||||||||||||
Sbjct: 16 tacttgaggagaaattatccttggtgtgttcactttatttgggatgaatcatacaaggac 75
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 76 aatttctttttgagta 91
>32201_mmu-mir-539:mirbase
Length = 74
Score = 87.7 bits (44), Expect = 1e-18
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
|||||||||||||||||||||||||||||| ||| | |||| || ||||||||||||||
Sbjct: 1 tacttgaggagaaattatccttggtgtgttggctct-tttg-gatgaatcatacaaggat 58
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 59 aatttctttttgagta 74
>32202_mmu-mir-539:mirbase
Length = 74
Score = 87.7 bits (44), Expect = 1e-18
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
|||||||||||||||||||||||||||||| ||| | |||| || ||||||||||||||
Sbjct: 1 tacttgaggagaaattatccttggtgtgttggctct-tttg-gatgaatcatacaaggat 58
Query: 61 aatttctttttgagta 76
||||||||||||||||
Sbjct: 59 aatttctttttgagta 74
>32949_rno-mir-539:mirbase
Length = 76
Score = 71.9 bits (36), Expect = 6e-14
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
|||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||
Sbjct: 2 tacttgaggagaaattatccttggtgtgtttgctct-tttg-gatgaatcatacaagggt 59
Query: 61 aatttctttttgagta 76
|||||||||| |||||
Sbjct: 60 aatttcttttcgagta 75
>33070_rno-mir-3576:mirbase
Length = 115
Score = 71.9 bits (36), Expect = 6e-14
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 1 tacttgaggagaaattatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggac 60
|||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||
Sbjct: 94 tacttgaggagaaattatccttggtgtgtttgctct-tttg-gatgaatcatacaagggt 37
Query: 61 aatttctttttgagta 76
|||||||||| |||||
Sbjct: 36 aatttcttttcgagta 21
>26856_cfa-mir-487a:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 15 ttatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggaca 61
|||||| || |||||||||||| ||| ||| |||||||||| |||||
Sbjct: 17 ttatccctgctgtgttcgctgtatttatgacgaatcatacagggaca 63
>27192_eca-mir-487a:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 15 ttatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggaca 61
|||||| || |||||||||||| ||| ||| |||||||||| |||||
Sbjct: 17 ttatccctgctgtgttcgctgtatttatgacgaatcatacagggaca 63
>33392_bta-mir-487a:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 15 ttatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggaca 61
|||||| || |||||||||||| ||| ||| |||||||||| |||||
Sbjct: 17 ttatccctgctgtgttcgctgtatttatgacgaatcatacagggaca 63
>33852_oar-mir-487a:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 1e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 16 tatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggaca 61
||||| || |||||||||||| ||| ||| |||||||||| |||||
Sbjct: 28 tatccctgctgtgttcgctgtatttatgacgaatcatacagggaca 73
>33853_oar-mir-487a:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 1e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 16 tatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggaca 61
||||| || |||||||||||| ||| ||| |||||||||| |||||
Sbjct: 28 tatccctgctgtgttcgctgtatttatgacgaatcatacagggaca 73
>30390_ptr-mir-487a:mirbase
Length = 79
Score = 38.2 bits (19), Expect = 8e-04
Identities = 40/47 (85%)
Strand = Plus / Plus
Query: 15 ttatccttggtgtgttcgctgtgtttgtgaggaatcatacaaggaca 61
|||||| || ||||||||||| ||| ||| |||||||||| |||||
Sbjct: 16 ttatccctgctgtgttcgctgaatttatgacgaatcatacagggaca 62
