miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00755;mir-542;ABRQ01123746.1/1402-1318 9813:Procavia capensis
          (cape rock hyrax)
          Length = 85

 Score =  117 bits (59), Expect = 1e-26
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                     
Query: 1  tcggggatcatcatgtcacgagataccactgtgcacttgtgacagattgataactgaaa 59
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcggggatcatcatgtcacgagataccactgtgcacttgtgacagattgataactgaaa 73





>RF00755;mir-542;AAIY01425199.1/1318-1400 9371:Echinops telfairi
          (small Madagascar hedgehog)
          Length = 83

 Score = 52.0 bits (26), Expect = 7e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 22 gataccactgtgcacttgtgacagattgataactgaaa 59
          ||||||||||   |||||||||||||||||||||||||
Sbjct: 34 gataccactgcatacttgtgacagattgataactgaaa 71