miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33423_bta-mir-582:mirbase
Length = 98
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 2 ctctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaa 61
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 8 ctctttggttacagttgttcaaccagttactaatctacctaattgtaaccagttgaacaa 67
Query: 62 ctgaacccaaagggtgcaaa 81
||||||||||||||||||||
Sbjct: 68 ctgaacccaaagggtgcaaa 87
>32217_mmu-mir-582:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 actctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaaca 60
||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 1 actctttggatacagttgttcaaccagttactaatctaactaattgtaacctgttgaaca 60
Query: 61 actgaacccaaagggtgcaaa 81
|||||||||||||||||||||
Sbjct: 61 actgaacccaaagggtgcaaa 81
>32218_mmu-mir-582:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 actctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaaca 60
||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 1 actctttggatacagttgttcaaccagttactaatctaactaattgtaacctgttgaaca 60
Query: 61 actgaacccaaagggtgcaaa 81
|||||||||||||||||||||
Sbjct: 61 actgaacccaaagggtgcaaa 81
>32959_rno-mir-582:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 actctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaaca 60
||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 1 actctttggatacagttgttcaaccagttactaatctaactaattgtaacctgttgaaca 60
Query: 61 actgaacccaaagggtgcaaa 81
|||||||||||||||||||||
Sbjct: 61 actgaacccaaagggtgcaaa 81
>28030_mml-mir-582:mirbase
Length = 98
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 2 ctctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaa 61
||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 8 ctctttgattacagttgttcaaccagttactaatctacctaattgtaactggttgaacaa 67
Query: 62 ctgaacccaaagggtgcaaa 81
||||||||||||||||||||
Sbjct: 68 ctgaacccaaagggtgcaaa 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 4 ctttggttacagttgttcaaccagttac 31
|||||| | |||||||||||||||||||
Sbjct: 79 ctttgggttcagttgttcaaccagttac 52
>28031_mml-mir-582:mirbase
Length = 98
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 2 ctctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaa 61
||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 8 ctctttgattacagttgttcaaccagttactaatctacctaattgtaactggttgaacaa 67
Query: 62 ctgaacccaaagggtgcaaa 81
||||||||||||||||||||
Sbjct: 68 ctgaacccaaagggtgcaaa 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 4 ctttggttacagttgttcaaccagttac 31
|||||| | |||||||||||||||||||
Sbjct: 79 ctttgggttcagttgttcaaccagttac 52
>28896_hsa-mir-582:mirbase
Length = 98
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 2 ctctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaa 61
||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 8 ctctttgattacagttgttcaaccagttactaatctaactaattgtaactggttgaacaa 67
Query: 62 ctgaacccaaagggtgcaaa 81
||||||||||||||||||||
Sbjct: 68 ctgaacccaaagggtgcaaa 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 4 ctttggttacagttgttcaaccagttac 31
|||||| | |||||||||||||||||||
Sbjct: 79 ctttgggttcagttgttcaaccagttac 52
>28897_hsa-mir-582:mirbase
Length = 98
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 2 ctctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaa 61
||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 8 ctctttgattacagttgttcaaccagttactaatctaactaattgtaactggttgaacaa 67
Query: 62 ctgaacccaaagggtgcaaa 81
||||||||||||||||||||
Sbjct: 68 ctgaacccaaagggtgcaaa 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 4 ctttggttacagttgttcaaccagttac 31
|||||| | |||||||||||||||||||
Sbjct: 79 ctttgggttcagttgttcaaccagttac 52
>30518_ptr-mir-582:mirbase
Length = 97
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 2 ctctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaa 61
||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 7 ctctttgattacagttgttcaaccagttactaatctaactaattgtaactggttgaacaa 66
Query: 62 ctgaacccaaagggtgcaaa 81
||||||||||||||||||||
Sbjct: 67 ctgaacccaaagggtgcaaa 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 4 ctttggttacagttgttcaaccagttac 31
|||||| | |||||||||||||||||||
Sbjct: 78 ctttgggttcagttgttcaaccagttac 51
>31161_ppy-mir-582:mirbase
Length = 98
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 2 ctctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaa 61
||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 8 ctctttgattacagttgttcaaccagttactaatctaactaattgtaactggttgaacaa 67
Query: 62 ctgaacccaaagggtgcaaa 81
||||||||||||||||||||
Sbjct: 68 ctgaacccaaagggtgcaaa 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 4 ctttggttacagttgttcaaccagttac 31
|||||| | |||||||||||||||||||
Sbjct: 79 ctttgggttcagttgttcaaccagttac 52
>31162_ppy-mir-582:mirbase
Length = 98
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 2 ctctttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaa 61
||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 8 ctctttgattacagttgttcaaccagttactaatctaactaattgtaactggttgaacaa 67
Query: 62 ctgaacccaaagggtgcaaa 81
||||||||||||||||||||
Sbjct: 68 ctgaacccaaagggtgcaaa 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 4 ctttggttacagttgttcaaccagttac 31
|||||| | |||||||||||||||||||
Sbjct: 79 ctttgggttcagttgttcaaccagttac 52
>27236_eca-mir-582:mirbase
Length = 68
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 5 tttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaactg 64
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 1 tttggttacagttgttcaaccagttactaatctaactaattgtaaccggttgaacaactg 60
Query: 65 aacccaaa 72
||||||||
Sbjct: 61 aacccaaa 68
>27237_eca-mir-582:mirbase
Length = 68
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 5 tttggttacagttgttcaaccagttactaatctagctaattgtaaccagttgaacaactg 64
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 1 tttggttacagttgttcaaccagttactaatctaactaattgtaaccggttgaacaactg 60
Query: 65 aacccaaa 72
||||||||
Sbjct: 61 aacccaaa 68
