miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>30524_ptr-mir-589:mirbase
          Length = 99

 Score = 77.8 bits (39), Expect = 9e-16
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                 
Query: 5  ctgagaaccatgtctgatcagagctgggtactgcctgttcagaacagacaccggt 59
          |||||||||||||||| || |||||||||||||||||||||||||| || |||||
Sbjct: 23 ctgagaaccatgtctgctctgagctgggtactgcctgttcagaacaaacgccggt 77




>28036_mml-mir-589:mirbase
          Length = 99

 Score = 73.8 bits (37), Expect = 1e-14
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                           
Query: 5  ctgagaaccatgtctgatcagagctgggtactgcctgttcagaacagac 53
          |||||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 23 ctgagaaccacgtctgctctgagctgggtactgcctgttcagaacagac 71




>28904_hsa-mir-589:mirbase
          Length = 99

 Score = 67.9 bits (34), Expect = 9e-13
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                        
Query: 5  ctgagaaccatgtctgatcagagctgggtactgcctgttcagaaca 50
          |||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 23 ctgagaaccacgtctgctctgagctgggtactgcctgttcagaaca 68




>31168_ppy-mir-589:mirbase
          Length = 99

 Score = 67.9 bits (34), Expect = 9e-13
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                        
Query: 5  ctgagaaccatgtctgatcagagctgggtactgcctgttcagaaca 50
          |||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 23 ctgagaaccacgtctgctctgagctgggtactgcctgttcagaaca 68