miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32221_mmu-mir-592:mirbase
Length = 96
Score = 174 bits (88), Expect = 7e-45
Identities = 95/96 (98%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 tgatattatgccatgacattgtgtcaatatgcgatgatgtgt-gtgatggcacagcgtca 59
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgatattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtca 60
Query: 60 tcacgtggtgacgcaacatcatgacgtaagacatca 95
||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcacgtggtgacgcaacatcatgacgtaagacatca 96
>33432_bta-mir-592:mirbase
Length = 96
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 4 tattatgccatgacattgtgtcaatatgcgatgatgtgtgtgatggcacagcgtcatcac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattatgccatgacattgtgtcaatatgcgatgatgtgtgtgatggcacagcgtcatcac 60
Query: 64 gtggtgacgcaacatcatgacgtaagac 91
||||||||||||||||||||||||||||
Sbjct: 61 gtggtgacgcaacatcatgacgtaagac 88
>32960_rno-mir-592:mirbase
Length = 96
Score = 167 bits (84), Expect = 2e-42
Identities = 94/96 (97%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 tgatattatgccatgacattgtgtcaatatgcgatgatgtgt-gtgatggcacagcgtca 59
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgatattatgccatggcattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtca 60
Query: 60 tcacgtggtgacgcaacatcatgacgtaagacatca 95
||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcacgtggtgacgcaacatcatgacgtaagacatca 96
>27240_eca-mir-592:mirbase
Length = 83
Score = 165 bits (83), Expect = 7e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 6 ttatgccatgacattgtgtcaatatgcgatgatgtgtgtgatggcacagcgtcatcacgt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttatgccatgacattgtgtcaatatgcgatgatgtgtgtgatggcacagcgtcatcacgt 60
Query: 66 ggtgacgcaacatcatgacgtaa 88
|||||||||||||||||||||||
Sbjct: 61 ggtgacgcaacatcatgacgtaa 83
>28039_mml-mir-592:mirbase
Length = 97
Score = 161 bits (81), Expect = 1e-40
Identities = 88/89 (98%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 4 tattatgccatgacattgtgtcaatatgcgatgatgtgt-gtgatggcacagcgtcatca 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 60
Query: 63 cgtggtgacgcaacatcatgacgtaagac 91
|||||||||||||||||||||||||||||
Sbjct: 61 cgtggtgacgcaacatcatgacgtaagac 89
>28908_hsa-mir-592:mirbase
Length = 97
Score = 161 bits (81), Expect = 1e-40
Identities = 88/89 (98%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 4 tattatgccatgacattgtgtcaatatgcgatgatgtgt-gtgatggcacagcgtcatca 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 60
Query: 63 cgtggtgacgcaacatcatgacgtaagac 91
|||||||||||||||||||||||||||||
Sbjct: 61 cgtggtgacgcaacatcatgacgtaagac 89
>30527_ptr-mir-592:mirbase
Length = 96
Score = 161 bits (81), Expect = 1e-40
Identities = 88/89 (98%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 4 tattatgccatgacattgtgtcaatatgcgatgatgtgt-gtgatggcacagcgtcatca 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 60
Query: 63 cgtggtgacgcaacatcatgacgtaagac 91
|||||||||||||||||||||||||||||
Sbjct: 61 cgtggtgacgcaacatcatgacgtaagac 89
>31172_ppy-mir-592:mirbase
Length = 97
Score = 161 bits (81), Expect = 1e-40
Identities = 88/89 (98%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 4 tattatgccatgacattgtgtcaatatgcgatgatgtgt-gtgatggcacagcgtcatca 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tattatgccatgacattgtgtcaatatgcgatgatgtgttgtgatggcacagcgtcatca 60
Query: 63 cgtggtgacgcaacatcatgacgtaagac 91
|||||||||||||||||||||||||||||
Sbjct: 61 cgtggtgacgcaacatcatgacgtaagac 89
