miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01897;mir-188;ABRT010259440.1/16-121 9478:Tarsius syrichta
(Philippine tarsier)
Length = 106
Score = 101 bits (51), Expect = 9e-22
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1 tacccattgcatatcggagttgtgaattctcaaagcacctcctgtgtgcatggattaca 59
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 26 tacccattgcatatcggagttgtgagttctcaaaacacctcctgtgtgcatggattaca 84
>RF01897;mir-188;AAGW01074233.1/428-323 9986:Oryctolagus cuniculus
(rabbit)
Length = 106
Score = 95.6 bits (48), Expect = 5e-20
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 1 tacccattgcatatcggagttgtgaattctcaaagcacctcctgtgtgcatggatt 56
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 26 tacccattgcatatcggagttgtaaattctcaaaacacctcctgtgtgcatggatt 81
>RF01897;mir-188;ABRQ01341134.1/10626-10731 9813:Procavia capensis
(cape rock hyrax)
Length = 106
Score = 77.8 bits (39), Expect = 1e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 1 tacccattgcatatcggagttgtgaattctcaaagcacctcctgtgtgcatggattaca 59
|||||||||||||| |||||||||| |||||||| |||||||| | |||||||||||||
Sbjct: 26 tacccattgcatattggagttgtgatttctcaaaacacctcctatatgcatggattaca 84
>RF01897;mir-188;AAKN02053571.1/50409-50514 10141:Cavia porcellus
(domestic guinea pig)
Length = 106
Score = 73.8 bits (37), Expect = 2e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1 tacccattgcatatcggagttgtgaattctcaaagcacctcctgtgtgcatggatta 57
|||||||||||||||||||||||||||||| ||| | ||||||| |||||||||||
Sbjct: 26 tacccattgcatatcggagttgtgaattcttaaaatatctcctgtatgcatggatta 82
