miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01920;mir-764;AANU01095684.1/3694-3803 9544:Macaca mulatta
(rhesus monkey)
Length = 110
Score = 159 bits (80), Expect = 8e-39
Identities = 92/96 (95%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccgtgcttggaaaatacagggaggaggc 60
|||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 15 aatctaggaggcaggtgctcacttgtcctcctccatggttggaaaatacaggggggaggc 74
Query: 61 catagtggcaactgtcaccatgattgatttcgttgg 96
||||||||||||||||||||||||| ||||||||||
Sbjct: 75 catagtggcaactgtcaccatgattaatttcgttgg 110
>RF01920;mir-764;ABRQ01091273.1/776-885 9813:Procavia capensis (cape
rock hyrax)
Length = 110
Score = 151 bits (76), Expect = 2e-36
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccgtgcttggaaaatacagggaggaggc 60
|||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 15 aatctaggagacaggtgctcacttgtcctcctccatgattggaaaatacagggaggaggc 74
Query: 61 catagtggcaactgtcaccatgattgatttcgttgg 96
||||||||||||||||||| ||||||||||| ||||
Sbjct: 75 catagtggcaactgtcaccgtgattgatttcattgg 110
>RF01920;mir-764;ABRR01198668.1/21902-22011 30538:Lama pacos
(alpaca)
Length = 110
Score = 143 bits (72), Expect = 5e-34
Identities = 90/96 (93%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccgtgcttggaaaatacagggaggaggc 60
|||||||||||||||||||||||||||||| ||| ||||| ||| ||| |||||||||||
Sbjct: 15 aatctaggaggcaggtgctcacttgtcctcttccatgcttagaagatatagggaggaggc 74
Query: 61 catagtggcaactgtcaccatgattgatttcgttgg 96
||||||||||||||||||||||||||||||| ||||
Sbjct: 75 catagtggcaactgtcaccatgattgatttcattgg 110
>RF01920;mir-764;AAIY01059417.1/2952-2845 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 108
Score = 133 bits (67), Expect = 5e-31
Identities = 89/95 (93%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccgtgcttggaaaatacagggaggaggc 60
|||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 14 aatctaggaggcaggtgctcacttgtcctcctccatgcttgg-aaatagagggaggaggt 72
Query: 61 catagtggcaactgtcaccatgattgatttcgttg 95
|||||||||||||| | ||||||||||||||||||
Sbjct: 73 catagtggcaactgcccccatgattgatttcgttg 107
>RF01920;mir-764;AAHY01204437.1/3239-3132 10090:Mus musculus (house
mouse)
Length = 108
Score = 127 bits (64), Expect = 3e-29
Identities = 89/96 (92%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccgtgcttggaaaatacagggaggaggc 60
||||| |||||||||||||||| ||||||||||| ||||| ||| |||| |||||||||
Sbjct: 14 aatcttggaggcaggtgctcacatgtcctcctccatgcttataaa-tacatggaggaggc 72
Query: 61 catagtggcaactgtcaccatgattgatttcgttgg 96
||||||||||||||||||||||||||||||||||||
Sbjct: 73 catagtggcaactgtcaccatgattgatttcgttgg 108
>RF01920;mir-764;AAKN02039766.1/25930-25821 10141:Cavia porcellus
(domestic guinea pig)
Length = 110
Score = 119 bits (60), Expect = 7e-27
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 15 gtgctcacttgtcctcctccgtgcttggaaaatacagggaggaggccatagtggcaactg 74
|||||||||||||||||||| || ||| || |||||||||||||||||||||||||||||
Sbjct: 29 gtgctcacttgtcctcctccatgtttgaaagatacagggaggaggccatagtggcaactg 88
Query: 75 tcaccatgattgattt 90
||||||||||||||||
Sbjct: 89 tcaccatgattgattt 104
>RF01920;mir-764;AAFC03083039.1/34010-33902 9913:Bos taurus (cattle)
Length = 109
Score = 71.9 bits (36), Expect = 1e-12
Identities = 82/96 (85%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccgtgcttggaaaatacagggaggaggc 60
||||||| ||||||||||||||| ||||| |||| | || ||||||||||||||||||
Sbjct: 15 aatctagtaggcaggtgctcactcgtccttctccacggtta-aaaatacagggaggaggc 73
Query: 61 catagtggcaactgtcaccatgattgatttcgttgg 96
|| | |||||||| |||| ||||||| |||| ||||
Sbjct: 74 cagaatggcaactatcactatgattgttttctttgg 109
