miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00887;mir-802;ABRN01256812.1/3792-3885 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 94
Score = 141 bits (71), Expect = 2e-33
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 3 ctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggagaat 62
|||||||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 4 ctattatttgcagtcagtaacaaagattcgtccttgtgtccatcaagcaacaaggagaat 63
Query: 63 ctttgtcacttagtgtaattaatagct 89
|||||||||||||||||||||||||||
Sbjct: 64 ctttgtcacttagtgtaattaatagct 90
>RF00887;mir-802;AANU01260813.1/2882-2789 9544:Macaca mulatta
(rhesus monkey)
Length = 94
Score = 131 bits (66), Expect = 2e-30
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 1 ttctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggaga 60
|||| ||||||| | |||||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct: 2 ttctgttatttgcaatcagtaacaaagattcatccttgtgtccatcatgcagcaaggaga 61
Query: 61 atctttgtcacttagtgtaattaatagctg 90
||||||||||||||||||||||||||||||
Sbjct: 62 atctttgtcacttagtgtaattaatagctg 91
>RF00887;mir-802;AAGW01512228.1/1362-1455 9986:Oryctolagus
cuniculus (rabbit)
Length = 94
Score = 131 bits (66), Expect = 2e-30
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 1 ttctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggaga 60
|||||||||||| | ||||||||||||||||| ||||| ||| |||| ||||||||||||
Sbjct: 2 ttctattatttgcagtcagtaacaaagattcagccttgggtctgtcacgcaacaaggaga 61
Query: 61 atctttgtcacttagtgtaattaatagctg 90
||||||||||||||||||||||||||||||
Sbjct: 62 atctttgtcacttagtgtaattaatagctg 91
>RF00887;mir-802;AAIY01234787.1/6341-6434 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 94
Score = 121 bits (61), Expect = 2e-27
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 2 tctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggagaa 61
||||||| ||| | |||||||||||||||||||||||||||| || |||| ||||||||
Sbjct: 3 tctattacttgcagtcagtaacaaagattcatccttgtgtccatcgagcagcaaggagag 62
Query: 62 tctttgtcacttagtgtaattaatagctg 90
|||||||||||||||||||||||||||||
Sbjct: 63 tctttgtcacttagtgtaattaatagctg 91
>RF00887;mir-802;AAQR01605094.1/1212-1305 30611:Otolemur garnettii
(small-eared galago)
Length = 94
Score = 109 bits (55), Expect = 6e-24
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 2 tctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggagaa 61
||||||||||| | |||||||||||||||||||||||||||| || ||||| |||||||
Sbjct: 3 tctattatttgcagtcagtaacaaagattcatccttgtgtccatcgtgcaaccaggagaa 62
Query: 62 tctttgtcacttagtgtaattaatagc 88
||||||||||| ||||| |||||||||
Sbjct: 63 tctttgtcactcagtgtgattaatagc 89
>RF00887;mir-802;AAKN02054460.1/185170-185077 10141:Cavia
porcellus (domestic guinea pig)
Length = 94
Score = 107 bits (54), Expect = 2e-23
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 1 ttctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggaga 60
|||||||||||| | |||||||||||||||||| |||||||| ||| |||||||||||
Sbjct: 2 ttctattatttgcagtcagtaacaaagattcattcttgtgtcaatcacacaacaaggaga 61
Query: 61 atctttgtcacttagtgtaattaatagctg 90
||||||||||||| |||||||||||||||
Sbjct: 62 atctttgtcacttcatgtaattaatagctg 91
>RF00887;mir-802;ABRT010235605.1/862-955 9478:Tarsius syrichta
(Philippine tarsier)
Length = 94
Score = 101 bits (51), Expect = 1e-21
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 1 ttctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggaga 60
|||||||||||| | |||||||||||||||||||| |||||| ||| | ||||| ||||
Sbjct: 2 ttctattatttgcagtcagtaacaaagattcatccctgtgtctatcatgtaacaaagaga 61
Query: 61 atctttgtcacttagtgtaattaatag 87
|||||||| ||||||||||||||||||
Sbjct: 62 atctttgttacttagtgtaattaatag 88
>RF00887;mir-802;CAAA01070983.1/4458-4365 10090:Mus musculus
(house mouse)
Length = 94
Score = 99.6 bits (50), Expect = 6e-21
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 3 ctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggagaat 62
|||||||||| | ||||||||||||||||||||||||||| ||| ||||| ||||| |
Sbjct: 4 ctattatttgcaatcagtaacaaagattcatccttgtgtcaatcatacaacacggagagt 63
Query: 63 ctttgtcacttagtgtaattaatagc 88
|||||||||| |||||||||||||||
Sbjct: 64 ctttgtcactcagtgtaattaatagc 89
>RF00887;mir-802;ABRO01068093.1/7346-7439 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 94
Score = 85.7 bits (43), Expect = 9e-17
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 2 tctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggagaa 61
||||||||||| | ||||||||||||||||||||||||||| ||| |||||||| |
Sbjct: 3 tctattatttgcagtcagtaacaaagattcatccttgtgtcaatcatacaacaagggggg 62
Query: 62 tctttgtcacttagtgtaattaatagc 88
||||||||||| ||||||| |||||||
Sbjct: 63 tctttgtcactcagtgtaactaatagc 89
>RF00887;mir-802;AAPN01075186.1/3091-3184 9258:Ornithorhynchus
anatinus (platypus)
Length = 94
Score = 75.8 bits (38), Expect = 8e-14
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 16 tcagtaacaaagattcatccttgtgtccgtcaagcaacaaggagaatctttgtcacttag 75
|||||||||||||||||||||||||||| |||||||| |||| ||||||||||| ||
Sbjct: 17 tcagtaacaaagattcatccttgtgtcctgtaagcaacagggagggtctttgtcactgag 76
Query: 76 tgtaattaat 85
|| |||||||
Sbjct: 77 tgcaattaat 86
>RF00887;mir-802;ABRT010612023.1/1350-1443 9478:Tarsius syrichta
(Philippine tarsier)
Length = 94
Score = 75.8 bits (38), Expect = 8e-14
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 1 ttctattatttgtactcagtaacaaagattcatccttgtgtccgtcaagcaacaaggaga 60
|||||||||||| | |||||||||||||||||||| ||||| | | | |||||| ||||
Sbjct: 2 ttctattatttgcagtcagtaacaaagattcatccctgtgttcattatgcaacacagaga 61
Query: 61 atctttgtcacttagtgtaattaatagctg 90
||||| | || ||||||||||||||||||
Sbjct: 62 atcttcattacctagtgtaattaatagctg 91
>RF00887;mir-802;AAQQ01243660.1/144-237 43179:Spermophilus
tridecemlineatus (thirteen-lined ground squirrel)
Length = 94
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 16 tcagtaacaaagattcatccttgtgtccgtcaagcaacaaggagaatctttgtcacttag 75
||||||||| ||||||||||||||||| ||| ||||||||| ||||| ||||||||
Sbjct: 17 tcagtaacagagattcatccttgtgtcgatcacgcaacaaggggaatcgctgtcacttcc 76
Query: 76 tgtaattaat 85
||||||||||
Sbjct: 77 tgtaattaat 86
>RF00887;mir-802;AAGU02174355.1/1524-1591 9785:Loxodonta africana
(African savanna elephant)
Length = 68
Score = 61.9 bits (31), Expect = 1e-09
Identities = 54/61 (88%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 16 tcagtaacaaagattcatcct---tgtgtccgtcaagcaacaaggagaatctttgtcact 72
||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||
Sbjct: 4 tcagtaacaaagattcatcacatatgtgtccatcaagcaacaaggagagtctttgtcact 63
Query: 73 t 73
|
Sbjct: 64 t 64
