miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46870_aqc-miR166e:pmrd
Length = 147
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 114 tgtcgtcggaccaggcttcattcccctcaa 143
||||||||||||||||||||||||||||||
Sbjct: 116 tgtcgtcggaccaggcttcattcccctcaa 145
>46949_ath-miR166e:pmrd
Length = 143
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 111 taatgtcgtcggaccaggcttcattcccctcaa 143
||||| |||||||||||||||||||||||||||
Sbjct: 111 taatgacgtcggaccaggcttcattcccctcaa 143
>51636_ptc-miR166l:pmrd
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 113 atgtcgtcggaccaggcttcattcccctcaa 143
||||| |||||||||||||||||||||||||
Sbjct: 62 atgtcctcggaccaggcttcattcccctcaa 92
>51633_ptc-miR166i:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 113 atgtcgtcggaccaggcttcattcccctcaa 143
||||| |||||||||||||||||||||||||
Sbjct: 68 atgtcctcggaccaggcttcattcccctcaa 98
>54793_vvi-miR166e:pmrd
Length = 166
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 114 tgtcgtcggaccaggcttcattcccc 139
||||||||||||||||||||||||||
Sbjct: 130 tgtcgtcggaccaggcttcattcccc 155
>54791_vvi-miR166c:pmrd
Length = 160
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 114 tgtcgtcggaccaggcttcattcccc 139
||||||||||||||||||||||||||
Sbjct: 124 tgtcgtcggaccaggcttcattcccc 149
>51630_ptc-miR166f:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaaa 144
||||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctcaaa 101
>48495_ghr-miR166b:pmrd
Length = 154
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 114 tgtcgtcggaccaggcttcattcccc 139
||||||||||||||||||||||||||
Sbjct: 125 tgtcgtcggaccaggcttcattcccc 150
>48344_bna-miR166c:pmrd
Length = 128
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccctcaa 143
||||||||||||||||||||||||||
Sbjct: 92 gtcggaccaggcttcattcccctcaa 117
>48343_bna-miR166b:pmrd
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccctcaa 143
||||||||||||||||||||||||||
Sbjct: 90 gtcggaccaggcttcattcccctcaa 115
>46950_ath-miR166f:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccctcaa 143
||||||||||||||||||||||||||
Sbjct: 77 gtcggaccaggcttcattcccctcaa 102
>46946_ath-miR166b:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 114 tgtcgtcggaccaggcttcattcccc 139
||||||||||||||||||||||||||
Sbjct: 91 tgtcgtcggaccaggcttcattcccc 116
>54972_zma-miR166p:pmrd
Length = 95
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaa 143
|||||||||||||||||||||||||
Sbjct: 71 tcggaccaggcttcattcccctcaa 95
>54795_vvi-miR166g:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaa 143
|||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctcaa 93
>54794_vvi-miR166f:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaa 143
|||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctcaa 93
>54792_vvi-miR166d:pmrd
Length = 160
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaa 143
|||||||||||||||||||||||||
Sbjct: 129 tcggaccaggcttcattcccctcaa 153
>54578_smo-miR166c:pmrd
Length = 138
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccctca 142
|||||||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattcccctca 130
>54543_sly-miR166a:pmrd
Length = 111
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaa 143
|||||||||||||||||||||||||
Sbjct: 86 tcggaccaggcttcattcccctcaa 110
>52289_ptc-miRf10467-akr:pmrd
Length = 123
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 115 gtcgtcggaccaggcttcattcccc 139
|||||||||||||||||||||||||
Sbjct: 29 gtcgtcggaccaggcttcattcccc 5
>51628_ptc-miR166d:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaa 143
|||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctcaa 100
>51627_ptc-miR166c:pmrd
Length = 134
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 115 gtcgtcggaccaggcttcattcccc 139
|||||||||||||||||||||||||
Sbjct: 101 gtcgtcggaccaggcttcattcccc 125
>51559_pta-miR166b:pmrd
Length = 125
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccctca 142
|||||||||||||||||||||||||
Sbjct: 89 gtcggaccaggcttcattcccctca 113
>48849_osa-miR166f:pmrd
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaa 143
|||||||||||||||||||||||||
Sbjct: 72 tcggaccaggcttcattcccctcaa 96
>48847_osa-miR166d:pmrd
Length = 125
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaa 143
|||||||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattcccctcaa 115
>48427_cpt-miR166:pmrd
Length = 160
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 115 gtcgtcggaccaggcttcattcccc 139
|||||||||||||||||||||||||
Sbjct: 125 gtcgtcggaccaggcttcattcccc 149
>48342_bna-miR166a:pmrd
Length = 135
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 115 gtcgtcggaccaggcttcattcccc 139
|||||||||||||||||||||||||
Sbjct: 107 gtcgtcggaccaggcttcattcccc 131
>48299_ath-miRf11199-akr:pmrd
Length = 135
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 111 taatgtcgtcggaccaggcttcattcccc 139
||||| |||||||||||||||||||||||
Sbjct: 107 taatgacgtcggaccaggcttcattcccc 135
>46951_ath-miR166g:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaa 143
|||||||||||||||||||||||||
Sbjct: 85 tcggaccaggcttcattcccctcaa 109
>54790_vvi-miR166b:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccctcaaat 145
|||||||||||||||||||| |||||||
Sbjct: 67 gtcggaccaggcttcattcctctcaaat 94
>54577_smo-miR166b:pmrd
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 99 tcggaccaggcttcattcccctca 122
>54576_smo-miR166a:pmrd
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 108 tcggaccaggcttcattcccctca 131
>54425_sbi-miR166j:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 85 tcggaccaggcttcattcccctca 108
>51637_ptc-miR166m:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>51374_ppt-miR166g:pmrd
Length = 146
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctca 119
>51373_ppt-miR166f:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>51372_ppt-miR166e:pmrd
Length = 146
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctca 119
>51369_ppt-miR166b:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>51368_ppt-miR166a:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>48844_osa-miR166a:pmrd
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 110 tcggaccaggcttcattcccctca 133
>48550_gma-miR166n:pmrd
Length = 409
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctca 142
||||||||||||||||||||||||
Sbjct: 1 tcggaccaggcttcattcccctca 24
>48494_ghr-miR166a:pmrd
Length = 147
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 tcgtcggaccaggcttcattcccc 139
||||||||||||||||||||||||
Sbjct: 124 tcgtcggaccaggcttcattcccc 147
>46944_ath-miR165b:pmrd
Length = 182
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 116 tcgtcggaccaggcttcattcccctcaa 143
||||||||||||||||||| ||||||||
Sbjct: 134 tcgtcggaccaggcttcatccccctcaa 161
>54973_zma-miR166q:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctc 141
|||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctc 91
>54970_zma-miR166n:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctc 141
|||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctc 96
>51558_pta-miR166a:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 cgtcggaccaggcttcattcccc 139
|||||||||||||||||||||||
Sbjct: 64 cgtcggaccaggcttcattcccc 86
>51371_ppt-miR166d:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctc 141
|||||||||||||||||||||||
Sbjct: 82 tcggaccaggcttcattcccctc 104
>51370_ppt-miR166c:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctc 141
|||||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccctc 99
>54633_sof-miR166:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaaa 144
||||||||||||||||||||| ||||
Sbjct: 1 tcggaccaggcttcattccccccaaa 26
>54544_sly-miR166b:pmrd
Length = 201
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccc 139
||||||||||||||||||||||
Sbjct: 153 gtcggaccaggcttcattcccc 174
>52014_ptc-miRf10192-akr:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccc 139
||||||||||||||||||||||
Sbjct: 107 gtcggaccaggcttcattcccc 128
>51635_ptc-miR166k:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccc 139
||||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattcccc 134
>51634_ptc-miR166j:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccc 139
||||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattcccc 134
>51625_ptc-miR166a:pmrd
Length = 164
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccc 139
||||||||||||||||||||||
Sbjct: 134 gtcggaccaggcttcattcccc 155
>51379_ppt-miR166l:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 cggaccaggcttcattcccctc 141
||||||||||||||||||||||
Sbjct: 85 cggaccaggcttcattcccctc 106
>51378_ppt-miR166k:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 cggaccaggcttcattcccctc 141
||||||||||||||||||||||
Sbjct: 79 cggaccaggcttcattcccctc 100
>51377_ppt-miR166j:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 cggaccaggcttcattcccctc 141
||||||||||||||||||||||
Sbjct: 83 cggaccaggcttcattcccctc 104
>51376_ppt-miR166i:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccct 140
||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccct 95
>51375_ppt-miR166h:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccct 140
||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattcccct 99
>48845_osa-miR166b:pmrd
Length = 206
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 119 tcggaccaggcttcattcccctcaaa 144
||||||||||||||||||||| ||||
Sbjct: 168 tcggaccaggcttcattccccccaaa 193
>48789_nsy-miR166:pmrd
Length = 187
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccc 139
||||||||||||||||||||||
Sbjct: 161 gtcggaccaggcttcattcccc 182
>48644_hce-miR165:pmrd
Length = 165
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 tgtcgtcggaccaggcttcattcccc 139
||||||||||||||||||||| ||||
Sbjct: 140 tgtcgtcggaccaggcttcatccccc 165
>48548_gma-miR166a:pmrd
Length = 146
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gtcggaccaggcttcattcccc 139
||||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattcccc 127
