miRNEST 2.0, an integrative microRNA resource :: BLAST
>54913_zma-miR156c:pmrd
Length = 139
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 gaaagctgacagaagagagtgagca 30
|||||||||||||||||||||||||
Sbjct: 15 gaaagctgacagaagagagtgagca 39
>54769_vvi-miR156d:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcatatgcaagcaatt 43
|||||||||||||||||||| ||||| ||||||
Sbjct: 10 ctgacagaagagagtgagcacatgcaggcaatt 42
>48243_ath-miRf11143-akr:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 agaaagctgacagaagagagtgagcatatgca 36
||||| |||||||||||||||||||| |||||
Sbjct: 97 agaaaactgacagaagagagtgagcacatgca 66
>46911_ath-miR156b:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 5 agaaagctgacagaagagagtgagcatatgca 36
||||| |||||||||||||||||||| |||||
Sbjct: 40 agaaaactgacagaagagagtgagcacatgca 71
>54916_zma-miR156f:pmrd
Length = 167
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 gtgctcacttctcttgctgtcagctc 107
||||||||||||||| ||||||||||
Sbjct: 129 gtgctcacttctctttctgtcagctc 154
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gctgacagaagagagtgagca 30
|||||||||||||||||||||
Sbjct: 19 gctgacagaagagagtgagca 39
>54398_sbi-miR156f:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 gtgctcacttctcttgctgtcagctc 107
||||||||||||||| ||||||||||
Sbjct: 103 gtgctcacttctctttctgtcagctc 128
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gctgacagaagagagtgagca 30
|||||||||||||||||||||
Sbjct: 1 gctgacagaagagagtgagca 21
>48528_gma-miR156a:pmrd
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gctgacagaagagagtgagcatatgc 35
||||||||||||||||||||| ||||
Sbjct: 19 gctgacagaagagagtgagcacatgc 44
>54917_zma-miR156g:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gctgacagaagagagtgagca 30
|||||||||||||||||||||
Sbjct: 2 gctgacagaagagagtgagca 22
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gtgctcacttctcttgctgtcagct 106
||||||||||||||| |||||||||
Sbjct: 97 gtgctcacttctctttctgtcagct 121
>54767_vvi-miR156b:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 gaaagctgacagaagagagtgagca 30
|||| ||||||||||||||||||||
Sbjct: 5 gaaaactgacagaagagagtgagca 29
>51591_ptc-miR156a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 9e-05
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Plus
Query: 3 aaagaaag-ctgacagaagagagtgagca 30
|||||||| ||||||||||||||||||||
Sbjct: 1 aaagaaagactgacagaagagagtgagca 29
>48812_osa-miR156l:pmrd
Length = 156
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 gacagaagagagtgagcatat 33
|||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcatat 32
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 81 tgtgctcacttctcttgctgtcagc 105
|||||||||||||||| ||||||||
Sbjct: 124 tgtgctcacttctctttctgtcagc 148
>48807_osa-miR156g:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gctgacagaagagagtgagca 30
|||||||||||||||||||||
Sbjct: 2 gctgacagaagagagtgagca 22
>48806_osa-miR156f:pmrd
Length = 186
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gtgctcacttctcttgctgtcagct 106
||||||||||||||| |||||||||
Sbjct: 162 gtgctcacttctctttctgtcagct 186
>48803_osa-miR156c:pmrd
Length = 149
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gctgacagaagagagtgagca 30
|||||||||||||||||||||
Sbjct: 27 gctgacagaagagagtgagca 47
>48425_cpt-miR156a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagcatatgcaagcaattgtat 47
|||||||||||||||||||| | ||| | ||||||||
Sbjct: 10 ctgacagaagagagtgagcacacgcaggtaattgtat 46
>54914_zma-miR156d:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 82 gtgctcacttctcttgctgtcagc 105
||||||||||||||| ||||||||
Sbjct: 78 gtgctcacttctctttctgtcagc 101
>54911_zma-miR156a:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 17 ctgacagaagagagtgagca 36
>54401_sbi-miR156i:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 2 ctgacagaagagagtgagca 21
>51926_ptc-miRf10104-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 7 ctgacagaagagagtgagca 26
>51596_ptc-miR156f:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagca 29
>51593_ptc-miR156c:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagca 29
>51354_ppr-miR156:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 1 ctgacagaagagagtgagca 20
>49442_osa-miRf10227-akr:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 90 ctgacagaagagagtgagca 71
>48815_osa-miR156o:pmrd
Length = 179
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagagagtgagcat 31
||||||||||||||||||||
Sbjct: 160 tgacagaagagagtgagcat 179
>48802_osa-miR156b:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 42 ctgacagaagagagtgagca 61
>48795_oru-miR156:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 1 ctgacagaagagagtgagca 20
>48491_ghr-miR156d:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Plus
Query: 79 cgtgtgctcacttctcttgctgtcagct 106
|||||||||||||||||| |||||||||
Sbjct: 68 cgtgtgctcacttctctt-ctgtcagct 94
>46912_ath-miR156c:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 11 ctgacagaagagagtgagca 30
>46910_ath-miR156a:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ctgacagaagagagtgagca 30
||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagca 39
