miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00766;mir-335;AAGW01323748.1/3556-3648 9986:Oryctolagus
cuniculus (rabbit)
Length = 93
Score = 137 bits (69), Expect = 2e-32
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 3 gcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattattgctcc 62
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gcgggagtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattattgctcc 68
Query: 63 tgacctcctctca 75
|||||||||||||
Sbjct: 69 tgacctcctctca 81
>RF00766;mir-335;ABRQ01225307.1/3130-3038 9813:Procavia capensis
(cape rock hyrax)
Length = 93
Score = 75.8 bits (38), Expect = 7e-14
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 5 gggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattattgctcctg 64
|||||||||||||||||||| |||| ||| || | |||| ||||||||||| ||||||||
Sbjct: 11 gggggtcaagagcaataacggaaaacgttggttagaaactgtttttcattactgctcctg 70
Query: 65 acctcc 70
||||||
Sbjct: 71 acctcc 76
