miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00761;mir-340;AAGU02785926.1/784-687 9785:Loxodonta africana
          (African savanna elephant)
          Length = 98

 Score =  113 bits (57), Expect = 3e-25
 Identities = 63/65 (96%)
 Strand = Plus / Plus

                                                                      
Query: 3  ttataaagcaatgagactgattgtcatgtgtcgcttgtgggatccgtctcagttacttta 62
          ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 19 ttataaagcaatgagactgattgtcatgtgtagtttgtgggatccgtctcagttacttta 78

               
Query: 63 tagcc 67
          |||||
Sbjct: 79 tagcc 83




>RF00761;mir-340;AAYZ01269178.1/2800-2703 9978:Ochotona princeps
          (American pika)
          Length = 98

 Score = 89.7 bits (45), Expect = 4e-18
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                      
Query: 3  ttataaagcaatgagactgattgtcatgtgtcgcttgtgggatccgtctcagttacttta 62
          ||||||||||||||||||||||||||| ||||  |  |||||||||||||||||||||||
Sbjct: 19 ttataaagcaatgagactgattgtcatatgtcattcatgggatccgtctcagttacttta 78

               
Query: 63 tagcc 67
          |||||
Sbjct: 79 tagcc 83