miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01898;mir-363;ABQF01018395.1/1892-1979 59729:Taeniopygia
guttata
Length = 88
Score = 133 bits (67), Expect = 3e-31
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 tgttgtcgggtggatcacgatgcaattttgattagtataataggagaaaaattgcacggt 60
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 9 tgttgtcgggtggatcacgatgcaattttgattagtttagtaggagaaaaattgcacggt 68
Query: 61 atccatctgtaaacc 75
|||||||||||||||
Sbjct: 69 atccatctgtaaacc 83
>RF01898;mir-363;AAHY01210291.1/5295-5208 10090:Mus musculus
(house mouse)
Length = 88
Score = 93.7 bits (47), Expect = 3e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 9 ggtggatcacgatgcaattttgattagtataataggagaaaaattgcacggtatccatct 68
|||||| ||||||||||||||| || || ||||||||| |||||||||||||||||||||
Sbjct: 17 ggtggaacacgatgcaattttggttggtgtaataggaggaaaattgcacggtatccatct 76
Query: 69 gtaaacc 75
|||||||
Sbjct: 77 gtaaacc 83
>RF01898;mir-363;AAIY01805305.1/474-387 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 88
Score = 58.0 bits (29), Expect = 2e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 16 cacgatgcaattttgattagtataataggagaaaaattgcacggtatccatct 68
||||||||||||||||||||| ||||||||||||| |||||||| |||||
Sbjct: 24 cacgatgcaattttgattagtcaggtaggagaaaaatttcacggtattcatct 76
>RF01898;mir-363;BX511227.7/24887-24794 7955:Danio rerio
(zebrafish)
Length = 94
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 47 aaaaattgcacggtatccatctgtaa 72
||||||||||||||||||||||||||
Sbjct: 61 aaaaattgcacggtatccatctgtaa 86
