miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>33346_bta-mir-374b:mirbase
          Length = 95

 Score =  143 bits (72), Expect = 2e-35
 Identities = 72/72 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  actcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatca 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 actcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatca 71

                      
Query: 61 ttgtccgtgtct 72
          ||||||||||||
Sbjct: 72 ttgtccgtgtct 83




>34077_ssc-mir-374b:mirbase
          Length = 80

 Score =  139 bits (70), Expect = 3e-34
 Identities = 70/70 (100%)
 Strand = Plus / Plus

                                                                      
Query: 3  tcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 62
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 60

                    
Query: 63 gtccgtgtct 72
          ||||||||||
Sbjct: 61 gtccgtgtct 70




>34078_ssc-mir-374b:mirbase
          Length = 80

 Score =  139 bits (70), Expect = 3e-34
 Identities = 70/70 (100%)
 Strand = Plus / Plus

                                                                      
Query: 3  tcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 62
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 60

                    
Query: 63 gtccgtgtct 72
          ||||||||||
Sbjct: 61 gtccgtgtct 70




>27877_mml-mir-374b:mirbase
          Length = 72

 Score =  135 bits (68), Expect = 5e-33
 Identities = 71/72 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  actcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatca 60
          |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1  actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60

                      
Query: 61 ttgtccgtgtct 72
          ||||||||||||
Sbjct: 61 ttgtccgtgtct 72



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 43/48 (89%), Gaps = 4/48 (8%)
 Strand = Plus / Minus

                                                          
Query: 13 ataatacaacctgctaagtgtcctag--cacttatcaggttgtattat 58
          ||||||||||||||||||||  ||||  |||||| |||||||||||||
Sbjct: 58 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 13




>28614_hsa-mir-374b:mirbase
          Length = 72

 Score =  135 bits (68), Expect = 5e-33
 Identities = 71/72 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  actcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatca 60
          |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1  actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60

                      
Query: 61 ttgtccgtgtct 72
          ||||||||||||
Sbjct: 61 ttgtccgtgtct 72



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 43/48 (89%), Gaps = 4/48 (8%)
 Strand = Plus / Minus

                                                          
Query: 13 ataatacaacctgctaagtgtcctag--cacttatcaggttgtattat 58
          ||||||||||||||||||||  ||||  |||||| |||||||||||||
Sbjct: 58 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 13




>30351_ptr-mir-374b:mirbase
          Length = 71

 Score =  133 bits (67), Expect = 2e-32
 Identities = 70/71 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  actcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatca 60
          |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1  actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 60

                     
Query: 61 ttgtccgtgtc 71
          |||||||||||
Sbjct: 61 ttgtccgtgtc 71



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 43/48 (89%), Gaps = 4/48 (8%)
 Strand = Plus / Minus

                                                          
Query: 13 ataatacaacctgctaagtgtcctag--cacttatcaggttgtattat 58
          ||||||||||||||||||||  ||||  |||||| |||||||||||||
Sbjct: 58 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 13




>28615_hsa-mir-374c:mirbase
          Length = 70

 Score =  131 bits (66), Expect = 7e-32
 Identities = 69/70 (98%)
 Strand = Plus / Minus

                                                                      
Query: 1  actcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatca 60
          |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 70 actcggatggatataatacaacctgctaagtgtcctagcacttagcaggttgtattatca 11

                    
Query: 61 ttgtccgtgt 70
          ||||||||||
Sbjct: 10 ttgtccgtgt 1



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 43/48 (89%), Gaps = 4/48 (8%)
 Strand = Plus / Plus

                                                          
Query: 13 ataatacaacctgctaagtgtcctag--cacttatcaggttgtattat 58
          ||||||||||||||||||||  ||||  |||||| |||||||||||||
Sbjct: 13 ataatacaacctgctaagtg--ctaggacacttagcaggttgtattat 58




>32042_mmu-mir-374:mirbase
          Length = 95

 Score =  109 bits (55), Expect = 3e-25
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  actcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatca 60
          |||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 12 actcgggtggatataatacaacctgctaagtgttctagcacttagcaggttgtattatca 71

                 
Query: 61 ttgtccg 67
          |||||||
Sbjct: 72 ttgtccg 78



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                        
Query: 13 ataatacaacctgctaagtgtcctagcacttatcaggttgtattat 58
          ||||||||||||||||||||    | |||||| |||||||||||||
Sbjct: 69 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 24




>26821_cfa-mir-374b:mirbase
          Length = 52

 Score =  103 bits (52), Expect = 2e-23
 Identities = 52/52 (100%)
 Strand = Plus / Plus

                                                              
Query: 11 atataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 62
          ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atataatacaacctgctaagtgtcctagcacttatcaggttgtattatcatt 52




>32887_rno-mir-374:mirbase
          Length = 68

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                      
Query: 2  ctcggatggatataatacaacctgctaagtgtcctagcacttatcaggttgtattatcat 61
          |||||||||||||||||||||||||||||||| |||||||||| || |||||||||| ||
Sbjct: 1  ctcggatggatataatacaacctgctaagtgttctagcacttagcacgttgtattattat 60

                
Query: 62 tgtccg 67
          ||||||
Sbjct: 61 tgtccg 66




>32043_mmu-mir-374c:mirbase
          Length = 49

 Score = 81.8 bits (41), Expect = 6e-17
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                           
Query: 11 atataatacaacctgctaagtgtcctagcacttatcaggttgtattatc 59
          ||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 49 atataatacaacctgctaagtgttctagcacttagcaggttgtattatc 1



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                        
Query: 13 ataatacaacctgctaagtgtcctagcacttatcaggttgtattat 58
          ||||||||||||||||||||    | |||||| |||||||||||||
Sbjct: 2  ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47




>27154_eca-mir-374a:mirbase
          Length = 72

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                     
Query: 12 tataatacaacctgctaagtgtcctagcacttatcaggttgtattatcattgtccgtgt 70
          |||||||||||||| |||||||   |||||||||||||||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttacagcacttatcaggttgtattgtaattgtctgtgt 71



 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                      
Query: 15 aatacaacctgctaagtgtcctagcacttatcaggttgtattat 58
          ||||||||||| ||||||   || ||||||||||||||||||||
Sbjct: 57 aatacaacctgataagtgctgtaacacttatcaggttgtattat 14




>28613_hsa-mir-374a:mirbase
          Length = 72

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                     
Query: 12 tataatacaacctgctaagtgtcctagcacttatcaggttgtattatcattgtccgtgt 70
          |||||||||||||| |||||||  ||||||||||||| ||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttatagcacttatcagattgtattgtaattgtctgtgt 71



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 39 cacttatcaggttgtattat 58
          ||||||||||||||||||||
Sbjct: 33 cacttatcaggttgtattat 14




>30350_ptr-mir-374a:mirbase
          Length = 71

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                     
Query: 12 tataatacaacctgctaagtgtcctagcacttatcaggttgtattatcattgtccgtgt 70
          |||||||||||||| |||||||  ||||||||||||| ||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttatagcacttatcagattgtattgtaattgtctgtgt 71



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 39 cacttatcaggttgtattat 58
          ||||||||||||||||||||
Sbjct: 33 cacttatcaggttgtattat 14




>30978_ppy-mir-374a:mirbase
          Length = 72

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                     
Query: 12 tataatacaacctgctaagtgtcctagcacttatcaggttgtattatcattgtccgtgt 70
          |||||||||||||| |||||||  ||||||||||||| ||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttgtagcacttatcagattgtattgtaattgtctgtgt 71



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 39 cacttatcaggttgtattat 58
          ||||||||||||||||||||
Sbjct: 33 cacttatcaggttgtattat 14




>33345_bta-mir-374a:mirbase
          Length = 72

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                     
Query: 12 tataatacaacctgctaagtgtcctagcacttatcaggttgtattatcattgtccgtgt 70
          |||||||||||||| |||||||   |||||||||||||||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttacagcacttatcaggttgtattgtaattgtctgtgt 71



 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                      
Query: 15 aatacaacctgctaagtgtcctagcacttatcaggttgtattat 58
          ||||||||||| ||||||   || ||||||||||||||||||||
Sbjct: 57 aatacaacctgataagtgctgtaacacttatcaggttgtattat 14




>34076_ssc-mir-374a:mirbase
          Length = 80

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                     
Query: 12 tataatacaacctgctaagtgtcctagcacttatcaggttgtattatcattgtccgtgt 70
          |||||||||||||| |||||||   |||||||||||||||||||| | |||||| ||||
Sbjct: 11 tataatacaacctgataagtgttacagcacttatcaggttgtattgtaattgtctgtgt 69



 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                      
Query: 15 aatacaacctgctaagtgtcctagcacttatcaggttgtattat 58
          ||||||||||| ||||||   || ||||||||||||||||||||
Sbjct: 55 aatacaacctgataagtgctgtaacacttatcaggttgtattat 12




>26820_cfa-mir-374a:mirbase
          Length = 52

 Score = 58.0 bits (29), Expect = 8e-10
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                       
Query: 12 tataatacaacctgctaagtgtcctagcacttatcaggttgtatt 56
          |||||||||||||| |||||||  ||||||||| |||||||||||
Sbjct: 2  tataatacaacctgataagtgttgtagcacttaccaggttgtatt 46



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 39 cacttatcaggttgtattat 58
          ||||||||||||||||||||
Sbjct: 22 cacttatcaggttgtattat 3




>27876_mml-mir-374a:mirbase
          Length = 72

 Score = 54.0 bits (27), Expect = 1e-08
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                     
Query: 12 tataatacaacctgctaagtgtcctagcacttatcaggttgtattatcattgtccgtgt 70
          |||||||||||||| |||||||   |||||||||||| ||||||| | |||||| ||||
Sbjct: 13 tataatacaacctgataagtgttacagcacttatcagattgtattgtaattgtctgtgt 71



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 39 cacttatcaggttgtattat 58
          ||||||||||||||||||||
Sbjct: 33 cacttatcaggttgtattat 14