miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00841;mir-384;AAGU02394078.1/2220-2133 9785:Loxodonta africana
          (African savanna elephant)
          Length = 88

 Score =  151 bits (76), Expect = 2e-36
 Identities = 85/88 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgttaaatcaggagttgtaaacaattcctaggcaatgtgtataatgtttgtaagtcattc 60
          ||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 1  tgttaaatcaggaattgtaaacaatttctaggcaatgtgtataatgtttataagtcattc 60

                                      
Query: 61 ctagaaattgttcacaatgcctgtaaca 88
          ||||||||||||||||||||||||||||
Sbjct: 61 ctagaaattgttcacaatgcctgtaaca 88




>RF00841;mir-384;CABD01473817.2/805-921 9595:Gorilla gorilla
          gorilla (Western lowland gorilla)
          Length = 117

 Score = 79.8 bits (40), Expect = 5e-15
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgttaaatcaggagttgtaaacaattcctaggcaatgtgtataatgtttgtaagtcattc 60
          |||||||||| || || |||||||||||||| |||| |||||||||||  ||||||||||
Sbjct: 1  tgttaaatcaagaattttaaacaattcctagacaatatgtataatgttcataagtcattc 60

                  
Query: 61 ctagaaat 68
          ||||||||
Sbjct: 61 ctagaaat 68