miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00870;mir-423;AAIY01635034.1/442-362 9371:Echinops telfairi
          (small Madagascar hedgehog)
          Length = 81

 Score =  125 bits (63), Expect = 6e-29
 Identities = 63/63 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9  aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 68

             
Query: 61 agt 63
          |||
Sbjct: 69 agt 71




>RF00870;mir-423;AAGU02429216.1/1470-1554 9785:Loxodonta africana
          (African savanna elephant)
          Length = 85

 Score = 48.1 bits (24), Expect = 1e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 5  tgaggggcagagagcgagactttt 28
          ||||||||||||||||||||||||
Sbjct: 13 tgaggggcagagagcgagactttt 36