miRNEST 2.0, an integrative microRNA resource :: BLAST
>33372_bta-mir-429:mirbase
Length = 84
Score = 117 bits (59), Expect = 1e-27
Identities = 66/67 (98%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gggcgtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgc 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 12 gggcgtcttaccagacacggttagatctg-gtccttctgtctaatactgtctggtaatgc 70
Query: 61 cgtccat 67
|||||||
Sbjct: 71 cgtccat 77
>26843_cfa-mir-429:mirbase
Length = 85
Score = 93.7 bits (47), Expect = 1e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 gggcgtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgc 60
||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct: 12 gggcgtcttaccagacacggttagatctgggttctggtgtctaatactgtctggtaatgc 71
Query: 61 cgt 63
|||
Sbjct: 72 cgt 74
>34094_ssc-mir-429:mirbase
Length = 81
Score = 93.7 bits (47), Expect = 1e-20
Identities = 60/63 (95%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 5 gtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgccgtc 64
|||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 14 gtcttaccaggcacggttagatctg-gttcttctgtctaatactgtctggtaatgccgtc 72
Query: 65 cat 67
|||
Sbjct: 73 cat 75
>25673_xla-mir-429:mirbase
Length = 68
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 5 gtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgccgtc 64
||||||||||||| ||||||||||| | | |||||||||||||||||||||||||||||
Sbjct: 6 gtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatgccgtc 65
Query: 65 cat 67
|||
Sbjct: 66 cat 68
>32069_mmu-mir-429:mirbase
Length = 83
Score = 85.7 bits (43), Expect = 3e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 5 gtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgccgtc 64
||||||||||||| ||||||||||| | | |||||||||||||||||||||||||||||
Sbjct: 14 gtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatgccgtc 73
Query: 65 cat 67
|||
Sbjct: 74 cat 76
>32910_rno-mir-429:mirbase
Length = 85
Score = 77.8 bits (39), Expect = 8e-16
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 5 gtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgccgtc 64
||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 16 gtcttaccagacatggttagatctggatgtatctgtctaatactgtctggtaatgccgtc 75
Query: 65 cat 67
|||
Sbjct: 76 cat 78
>27902_mml-mir-429:mirbase
Length = 83
Score = 67.9 bits (34), Expect = 8e-13
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 3 gcgtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgccg 62
||||||||||||||||||||||| ||| || |||||||||||||||||||||| |||
Sbjct: 14 gcgtcttaccagacacggttagacctggctc--tctgtctaatactgtctggtaaaaccg 71
Query: 63 tccat 67
|||||
Sbjct: 72 tccat 76
>28649_hsa-mir-429:mirbase
Length = 83
Score = 63.9 bits (32), Expect = 1e-11
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 1 gggcgtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgc 60
||||||||||||||||| ||||||| ||| || |||||||||||||||||||||| |
Sbjct: 12 gggcgtcttaccagacatggttagacctgg--ccctctgtctaatactgtctggtaaaac 69
Query: 61 cgtccat 67
|||||||
Sbjct: 70 cgtccat 76
>31003_ppy-mir-429:mirbase
Length = 80
Score = 63.9 bits (32), Expect = 1e-11
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 1 gggcgtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgc 60
||||||||||||||||| ||||||| ||| || |||||||||||||||||||||| |
Sbjct: 12 gggcgtcttaccagacatggttagacctgg--ccgtctgtctaatactgtctggtaaaac 69
Query: 61 cgtccat 67
|||||||
Sbjct: 70 cgtccat 76
>34400_dre-mir-429:mirbase
Length = 82
Score = 63.9 bits (32), Expect = 1e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 4 cgtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgccgt 63
|||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 13 cgtcttaccagacatggttagatgtaataacttgtgtctaatactgtctggtaatgccgt 72
Query: 64 ccat 67
||||
Sbjct: 73 ccat 76
>26026_gga-mir-429:mirbase
Length = 84
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 35 ttctgtctaatactgtctggtaatgccgtc 64
||||||||||||||||||||||||||||||
Sbjct: 45 ttctgtctaatactgtctggtaatgccgtc 74
>34652_fru-mir-429:mirbase
Length = 76
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 38 tgtctaatactgtctggtaatgccgtccat 67
||||||||||||||||||||||||||||||
Sbjct: 47 tgtctaatactgtctggtaatgccgtccat 76
>34800_tni-mir-429:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 38 tgtctaatactgtctggtaatgccgtccat 67
||||||||||||||||||||||||||||||
Sbjct: 49 tgtctaatactgtctggtaatgccgtccat 78
>27450_mdo-mir-429:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 8e-10
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 5 gtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgcc 61
||||||||||||| ||||||||| | |||||||||||||||||||||||||||
Sbjct: 8 gtcttaccagacaaagttagatctcgctatttctgtctaatactgtctggtaatgcc 64
>31552_oan-mir-429:mirbase
Length = 112
Score = 56.0 bits (28), Expect = 3e-09
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 5 gtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgccgtc 64
||||||||||||| |||||||||| | || ||||||||||||||||||||||||||
Sbjct: 27 gtcttaccagacaaagttagatctgactattttcgtctaatactgtctggtaatgccgtc 86
>25860_xtr-mir-429:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 5 gtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgccgt 63
||||||||||||| |||||||||| | || |||||||||||||||||||||||||
Sbjct: 16 gtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 74
>34401_dre-mir-429b:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 38 tgtctaatactgtctggtaatgcc 61
|||||||||||| |||||||||||
Sbjct: 63 tgtctaatactgcctggtaatgcc 86
>34889_sko-mir-200:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 tctaatactgtctggtaatg 59
||||||||||||||||||||
Sbjct: 59 tctaatactgtctggtaatg 78
>24693_bfl-mir-200b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 41 ctaatactgtctggtaatg 59
|||||||||||||||||||
Sbjct: 58 ctaatactgtctggtaatg 76
