miRNEST 2.0, an integrative microRNA resource :: BLAST
>27933_mml-mir-493:mirbase
Length = 89
Score = 145 bits (73), Expect = 6e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 ctggcctccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggcctccagggctttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 60
Query: 61 ggtcttccgtgtgccaggctctgtgccag 89
||||| | ||||||||||| |||||||||
Sbjct: 61 ggtctactgtgtgccaggccctgtgccag 89
>28684_hsa-mir-493:mirbase
Length = 89
Score = 145 bits (73), Expect = 6e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 ctggcctccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggcctccagggctttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 60
Query: 61 ggtcttccgtgtgccaggctctgtgccag 89
||||| | ||||||||||| |||||||||
Sbjct: 61 ggtctactgtgtgccaggccctgtgccag 89
>31032_ppy-mir-493:mirbase
Length = 89
Score = 145 bits (73), Expect = 6e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 ctggcctccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggcctccagggctttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 60
Query: 61 ggtcttccgtgtgccaggctctgtgccag 89
||||| | ||||||||||| |||||||||
Sbjct: 61 ggtctactgtgtgccaggccctgtgccag 89
>33398_bta-mir-493:mirbase
Length = 89
Score = 145 bits (73), Expect = 6e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 ctggcctccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggcccccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 60
Query: 61 ggtcttccgtgtgccaggctctgtgccag 89
||||| | ||||||||||| |||||||||
Sbjct: 61 ggtctactgtgtgccaggccctgtgccag 89
>33856_oar-mir-493:mirbase
Length = 115
Score = 145 bits (73), Expect = 6e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 ctggcctccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ctggcccccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 70
Query: 61 ggtcttccgtgtgccaggctctgtgccag 89
||||| | ||||||||||| |||||||||
Sbjct: 71 ggtctactgtgtgccaggccctgtgccag 99
>33857_oar-mir-493:mirbase
Length = 115
Score = 145 bits (73), Expect = 6e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 1 ctggcctccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ctggcccccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaa 70
Query: 61 ggtcttccgtgtgccaggctctgtgccag 89
||||| | ||||||||||| |||||||||
Sbjct: 71 ggtctactgtgtgccaggccctgtgccag 99
>32935_rno-mir-493:mirbase
Length = 84
Score = 129 bits (65), Expect = 4e-31
Identities = 81/85 (95%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 3 ggcctccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaagg 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ggcctccagggccttgtacatggtaggctttcattcatt-gtttgcacattcggtgaagg 59
Query: 63 tcttccgtgtgccaggctctgtgcc 87
||| | ||||||||||| |||||||
Sbjct: 60 tctactgtgtgccaggccctgtgcc 84
>26862_cfa-mir-493:mirbase
Length = 61
Score = 105 bits (53), Expect = 5e-24
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 17 tgtacatggtaggctttcattcattcgtttgcacattcggtgaaggtcttccgtgtgcca 76
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 1 tgtacatggtaggctttcattcattcgtttgcacattcggtgaaggtctactgtgtgcca 60
Query: 77 g 77
|
Sbjct: 61 g 61
>32182_mmu-mir-493:mirbase
Length = 83
Score = 99.6 bits (50), Expect = 3e-22
Identities = 76/82 (92%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 8 ccagggccttgtacatggtaggctttcattcattcgtttgcacattcggtgaaggt-ctt 66
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 3 ccagggccttgtacatggtaggctttcattcatt-ttttgcacattcggtgaaggtccta 61
Query: 67 ccgtgtgccaggctctgtgcca 88
| ||||||||||| ||||||||
Sbjct: 62 ctgtgtgccaggccctgtgcca 83
