miRNEST 2.0, an integrative microRNA resource :: BLAST
>27935_mml-mir-495:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 tggtccctgaaaagaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatg 60
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 tggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatg 60
Query: 61 gtgcacttctttttcggtatca 82
||||||||||||||||||||||
Sbjct: 61 gtgcacttctttttcggtatca 82
>28686_hsa-mir-495:mirbase
Length = 82
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 tggtccctgaaaagaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatg 60
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 tggtacctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatg 60
Query: 61 gtgcacttctttttcggtatca 82
||||||||||||||||||||||
Sbjct: 61 gtgcacttctttttcggtatca 82
>30398_ptr-mir-495:mirbase
Length = 81
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 6 cctgaaaagaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgca 65
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 cctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgca 64
Query: 66 cttctttttcggtatca 82
|||||||||||||||||
Sbjct: 65 cttctttttcggtatca 81
>31034_ppy-mir-495:mirbase
Length = 79
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 6 cctgaaaagaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgca 65
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3 cctgaaaagaagttgcccatgttattttcgctttatatgtgacgaaacaaacatggtgca 62
Query: 66 cttctttttcggtatca 82
|||||||||||||||||
Sbjct: 63 cttctttttcggtatca 79
>33400_bta-mir-495:mirbase
Length = 81
Score = 107 bits (54), Expect = 1e-24
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 tggtccctgaaaagaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatg 60
|||| |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 1 tggtgcctggaaagaagttgcccatgttcttttcgct-gatatgtgacgaaacaaacatg 59
Query: 61 gtgcacttctttttcggtatca 82
||||||||||||| ||| ||||
Sbjct: 60 gtgcacttcttttccggcatca 81
>33860_oar-mir-495:mirbase
Length = 126
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 1 tggtccctgaaaagaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatg 60
|||| ||||| ||||||| ||||||||| |||||||||||| |||| |||||||||||||
Sbjct: 30 tggtacctgagaagaagtcgcccatgttcttttcgcttgatttgtgtcgaaacaaacatg 89
Query: 61 gtgcacttctttttcggt 78
||||||||||||||||||
Sbjct: 90 gtgcacttctttttcggt 107
>33861_oar-mir-495:mirbase
Length = 126
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 1 tggtccctgaaaagaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatg 60
|||| ||||| ||||||| ||||||||| |||||||||||| |||| |||||||||||||
Sbjct: 30 tggtacctgagaagaagtcgcccatgttcttttcgcttgatttgtgtcgaaacaaacatg 89
Query: 61 gtgcacttctttttcggt 78
||||||||||||||||||
Sbjct: 90 gtgcacttctttttcggt 107
>32937_rno-mir-495:mirbase
Length = 80
Score = 99.6 bits (50), Expect = 3e-22
Identities = 73/78 (93%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 6 cctgaaaagaagttgcccatgttatttt-cgcttg-atatgtgacgaaacaaacatggtg 63
|||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 3 cctgaaaagaagttgcccatgttatttttcgcttttatttgtgacgaaacaaacatggtg 62
Query: 64 cacttctttttcggtatc 81
||||||||||||| ||||
Sbjct: 63 cacttctttttcgatatc 80
>26864_cfa-mir-495:mirbase
Length = 58
Score = 91.7 bits (46), Expect = 7e-20
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 14 gaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttctt 71
|||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 1 gaagttgcccgtgttattttcgcttgatacgtgccgaaacaaacatggtgcacttctt 58
>32184_mmu-mir-495:mirbase
Length = 63
Score = 77.8 bits (39), Expect = 1e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 11 aaagaagttgcccatgttatttt-cgcttg-atatgtgacgaaacaaacatggtgcactt 68
||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 1 aaagaagttgcccatgttatttttcgcttttatttgtgacgaaacaaacatggtgcactt 60
Query: 69 ctt 71
|||
Sbjct: 61 ctt 63
>28791_hsa-mir-543:mirbase
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| |||| ||||||||| || |||||||||||| | |||||||||||||
Sbjct: 10 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 69
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 70 ttcagtatc 78
>31130_ppy-mir-543:mirbase
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| |||| ||||||||| || |||||||||||| | |||||||||||||
Sbjct: 10 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 69
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 70 ttcagtatc 78
>33414_bta-mir-543:mirbase
Length = 80
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| ||| ||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 12 agaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 71
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 72 ttcagtatc 80
>33868_oar-mir-543:mirbase
Length = 123
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| ||| ||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 40 agaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 99
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 100 ttcagtatc 108
>33869_oar-mir-543:mirbase
Length = 123
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| ||| ||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 40 agaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 99
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 100 ttcagtatc 108
>27229_eca-mir-543:mirbase
Length = 72
Score = 61.9 bits (31), Expect = 6e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| |||| ||||||||| || |||||||||||| | |||||||||||||
Sbjct: 8 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 67
Query: 73 ttc 75
|||
Sbjct: 68 ttc 70
>27993_mml-mir-543:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| ||| ||||||||| || |||||||||||| | |||||||||||||
Sbjct: 12 agaagttgcccgtgtctttttcgctttatttgtgacgaaacattcgcggtgcacttcttt 71
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 72 ttcagtatc 80
>30467_ptr-mir-543:mirbase
Length = 77
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| |||| ||||||||| || |||||||||||| | ||||||||||||
Sbjct: 9 agaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttcttc 68
Query: 73 ttcggtatc 81
||| |||||
Sbjct: 69 ttcagtatc 77
>32208_mmu-mir-543:mirbase
Length = 76
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| || ||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 10 agaagttgcccgcgtgtttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 69
Query: 73 ttc 75
|||
Sbjct: 70 ttc 72
>32954_rno-mir-543:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 13 agaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttcttt 72
||||||||||| || ||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 12 agaagttgcccgcgtgtttttcgctttatatgtgacgaaacattcgcggtgcacttcttt 71
Query: 73 ttc 75
|||
Sbjct: 72 ttc 74
>26877_cfa-mir-543:mirbase
Length = 58
Score = 52.0 bits (26), Expect = 6e-08
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 14 gaagttgcccatgttattttcgcttgatatgtgacgaaacaaacatggtgcacttctt 71
|||||||||| |||| ||||||||| || |||||||||||| | ||||||||||||
Sbjct: 1 gaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgcacttctt 58
