miRNEST 2.0, an integrative microRNA resource :: BLAST
>33404_bta-mir-500:mirbase
Length = 84
Score = 145 bits (73), Expect = 6e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
Query: 61 ggcaaggattccgagag 77
||||||||||| |||||
Sbjct: 61 ggcaaggattctgagag 77
>27210_eca-mir-500:mirbase
Length = 84
Score = 141 bits (71), Expect = 9e-35
Identities = 80/83 (96%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgttgtctgaatgcaatgcacctg 60
Query: 61 ggcaaggattccgagagggagag 83
||||||||||||||||| |||||
Sbjct: 61 ggcaaggattccgagagcgagag 83
>27941_mml-mir-500:mirbase
Length = 84
Score = 141 bits (71), Expect = 9e-35
Identities = 80/83 (96%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgctatctgaatgcaatgcacctg 60
Query: 61 ggcaaggattccgagagggagag 83
||||||||||| ||||| |||||
Sbjct: 61 ggcaaggattctgagagcgagag 83
>28694_hsa-mir-500a:mirbase
Length = 84
Score = 141 bits (71), Expect = 9e-35
Identities = 80/83 (96%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgctgtctgaatgcaatgcacctg 60
Query: 61 ggcaaggattccgagagggagag 83
||||||||||| ||||| |||||
Sbjct: 61 ggcaaggattctgagagcgagag 83
>31040_ppy-mir-500:mirbase
Length = 84
Score = 141 bits (71), Expect = 9e-35
Identities = 80/83 (96%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgctgtctgaatgcaatgcacctg 60
Query: 61 ggcaaggattccgagagggagag 83
||||||||||| ||||| |||||
Sbjct: 61 ggcaaggattctgagagcgagag 83
>30403_ptr-mir-500:mirbase
Length = 83
Score = 131 bits (66), Expect = 9e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 2 ctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgg 61
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ctccccctctctaatccttgctacctgggtgagagtgctgtctgaatgcaatgcacctgg 60
Query: 62 gcaaggattc 71
||||||||||
Sbjct: 61 gcaaggattc 70
>34114_ssc-mir-500:mirbase
Length = 80
Score = 125 bits (63), Expect = 5e-30
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 5 cccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggca 64
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 1 cccctctctaatccttgctacctgggtgagagtgctgtgtgaatgcaatgcacctgggca 60
Query: 65 aggattccgagagggagag 83
||||||| ||||| |||||
Sbjct: 61 aggattctgagagtgagag 79
>26868_cfa-mir-500:mirbase
Length = 59
Score = 115 bits (58), Expect = 5e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 14 aatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaaggattc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaaggattc 58
>30404_ptr-mir-500-2:mirbase
Length = 79
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 3 tccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctggg 62
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 1 tccccctctctaatccttgctacctgggtgagagtgctttctgaatgcagtgcacccagg 60
Query: 63 caaggattc 71
|||||||||
Sbjct: 61 caaggattc 69
>28695_hsa-mir-500b:mirbase
Length = 79
Score = 111 bits (56), Expect = 8e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 4 ccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggc 63
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 1 ccccctctctaatccttgctacctgggtgagagtgctttctgaatgcagtgcacccaggc 60
Query: 64 aaggattc 71
||||||||
Sbjct: 61 aaggattc 68
>27213_eca-mir-502:mirbase
Length = 80
Score = 109 bits (55), Expect = 3e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||
Sbjct: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
Query: 61 ggcaaggattccgagaggg 79
||||||||||| |||||||
Sbjct: 62 ggcaaggattcagagaggg 80
>27214_eca-mir-502:mirbase
Length = 80
Score = 109 bits (55), Expect = 3e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||
Sbjct: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
Query: 61 ggcaaggattccgagaggg 79
||||||||||| |||||||
Sbjct: 62 ggcaaggattcagagaggg 80
>31042_ppy-mir-502:mirbase
Length = 86
Score = 109 bits (55), Expect = 3e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||
Sbjct: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
Query: 61 ggcaaggattccgagaggg 79
||||||||||| |||||||
Sbjct: 62 ggcaaggattcagagaggg 80
>31043_ppy-mir-502:mirbase
Length = 86
Score = 109 bits (55), Expect = 3e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||
Sbjct: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
Query: 61 ggcaaggattccgagaggg 79
||||||||||| |||||||
Sbjct: 62 ggcaaggattcagagaggg 80
>28696_hsa-mir-501:mirbase
Length = 84
Score = 105 bits (53), Expect = 5e-24
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 7 cctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaag 66
|||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 7 cctctctaatcctttgtccctgggtgagagtgctttctgaatgcaatgcacccgggcaag 66
Query: 67 gattccgagaggg 79
||||| |||||||
Sbjct: 67 gattctgagaggg 79
>28697_hsa-mir-501:mirbase
Length = 84
Score = 105 bits (53), Expect = 5e-24
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 7 cctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaag 66
|||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 7 cctctctaatcctttgtccctgggtgagagtgctttctgaatgcaatgcacccgggcaag 66
Query: 67 gattccgagaggg 79
||||| |||||||
Sbjct: 67 gattctgagaggg 79
>30405_ptr-mir-501:mirbase
Length = 83
Score = 105 bits (53), Expect = 5e-24
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 7 cctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaag 66
|||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 6 cctctctaatcctttgtccctgggtgagagtgctttctgaatgcaatgcacccgggcaag 65
Query: 67 gattccgagaggg 79
||||| |||||||
Sbjct: 66 gattctgagaggg 78
>28698_hsa-mir-502:mirbase
Length = 86
Score = 101 bits (51), Expect = 8e-23
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||
Sbjct: 2 gctccccctctctaatccttgctatctgggtgctagtgctggctcaatgcaatgcacctg 61
Query: 61 ggcaaggattccgagaggg 79
||||||||||| |||||||
Sbjct: 62 ggcaaggattcagagaggg 80
>28699_hsa-mir-502:mirbase
Length = 86
Score = 101 bits (51), Expect = 8e-23
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||
Sbjct: 2 gctccccctctctaatccttgctatctgggtgctagtgctggctcaatgcaatgcacctg 61
Query: 61 ggcaaggattccgagaggg 79
||||||||||| |||||||
Sbjct: 62 ggcaaggattcagagaggg 80
>30406_ptr-mir-502:mirbase
Length = 85
Score = 101 bits (51), Expect = 8e-23
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctatctgggtgctagtgctggctcaatgcaatgcacctg 60
Query: 61 ggcaaggattccgagaggg 79
||||||||||| |||||||
Sbjct: 61 ggcaaggattcagagaggg 79
>27943_mml-mir-502:mirbase
Length = 80
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 6 ccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaa 65
||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||
Sbjct: 1 ccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaa 60
Query: 66 ggattccgagaggg 79
|||||| |||||||
Sbjct: 61 ggattcagagaggg 74
>27944_mml-mir-502:mirbase
Length = 80
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 6 ccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaa 65
||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||
Sbjct: 1 ccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaa 60
Query: 66 ggattccgagaggg 79
|||||| |||||||
Sbjct: 61 ggattcagagaggg 74
>31041_ppy-mir-501:mirbase
Length = 78
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 7 cctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaag 66
|||||||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||
Sbjct: 1 cctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaag 60
Query: 67 gattccgagaggg 79
||||| |||||||
Sbjct: 61 gattcagagaggg 73
>27212_eca-mir-501:mirbase
Length = 84
Score = 95.6 bits (48), Expect = 5e-21
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
|||| |||||||| |||||| | ||||||||||||||||||| ||||||||||||||||
Sbjct: 1 gctctccctctctcatccttcgtccctgggtgagagtgctttccgaatgcaatgcacctg 60
Query: 61 ggcaaggattcc 72
||||||||||||
Sbjct: 61 ggcaaggattcc 72
>27942_mml-mir-501:mirbase
Length = 84
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 7 cctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaag 66
|||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 7 cctctctaatcctttgtccctgggtgagagtgctttctgaatgcagtgcacccaggcaag 66
Query: 67 gattccgagaggg 79
||||| |||||||
Sbjct: 67 gattctgagaggg 79
>33407_bta-mir-502b:mirbase
Length = 83
Score = 85.7 bits (43), Expect = 5e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 5 cccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggca 64
|||||||||||| |||||| || |||||||||||||| |||||||||| ||||||||||
Sbjct: 4 cccctctctaattcttgctccccaggtgagagtgctttgtgaatgcaatccacctgggca 63
Query: 65 aggattc 71
|||||||
Sbjct: 64 aggattc 70
>32188_mmu-mir-500:mirbase
Length = 92
Score = 81.8 bits (41), Expect = 7e-17
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 gctccccctctctaatccttgctacctgggtg-agagtgctttctgaatgcaatgcacct 59
|||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||
Sbjct: 8 gctccccctctctaatccttgctatctgggtgcttagtgctatctcaatgcaatgcacct 67
Query: 60 gggcaaggattccgaga 76
|||||||| ||| ||||
Sbjct: 68 gggcaagggttcagaga 84
>26869_cfa-mir-502:mirbase
Length = 59
Score = 75.8 bits (38), Expect = 4e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 14 aatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaaggattc 71
||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||
Sbjct: 1 aatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaaggattc 58
>32941_rno-mir-500:mirbase
Length = 80
Score = 75.8 bits (38), Expect = 4e-15
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 4 ccccctctctaatccttgctacctgggtgag-agtgctttctgaatgcaatgcacctggg 62
||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||||
Sbjct: 1 ccccctctctaatccttgctatctgggtgcttagtgctatctcaatgcaatgcacctggg 60
Query: 63 caaggattccgaga 76
||||| ||| ||||
Sbjct: 61 caagggttcagaga 74
>33405_bta-mir-502a-1:mirbase
Length = 85
Score = 75.8 bits (38), Expect = 4e-15
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 10 ctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaaggat 69
|||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||
Sbjct: 10 ctctaatccttgctctctgggtgctagtgctgtctccatgcaatgcacctgggcaaggat 69
Query: 70 tccgagaggg 79
|| |||||||
Sbjct: 70 tcagagaggg 79
>32189_mmu-mir-501:mirbase
Length = 109
Score = 56.0 bits (28), Expect = 4e-09
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 7 cctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaag 66
|||||||||||||| | ||||||||| | |||| | || |||||||||||| |||||||
Sbjct: 17 cctctctaatcctttgtccctgggtgaaaatgctatttgtatgcaatgcacccgggcaag 76
Query: 67 gatt 70
||||
Sbjct: 77 gatt 80
>32190_mmu-mir-501:mirbase
Length = 109
Score = 56.0 bits (28), Expect = 4e-09
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 7 cctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaag 66
|||||||||||||| | ||||||||| | |||| | || |||||||||||| |||||||
Sbjct: 17 cctctctaatcctttgtccctgggtgaaaatgctatttgtatgcaatgcacccgggcaag 76
Query: 67 gatt 70
||||
Sbjct: 77 gatt 80
>32942_rno-mir-501:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 7 cctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaag 66
|||||||||||||| | ||||||||| | |||| | || |||||||||||| |||||||
Sbjct: 7 cctctctaatcctttgtccctgggtgaaaatgctatttgtatgcaatgcacccgggcaag 66
Query: 67 gatt 70
||||
Sbjct: 67 gatt 70
>33052_rno-mir-3560:mirbase
Length = 112
Score = 56.0 bits (28), Expect = 4e-09
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 7 cctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaag 66
|||||||||||||| | ||||||||| | |||| | || |||||||||||| |||||||
Sbjct: 95 cctctctaatcctttgtccctgggtgaaaatgctatttgtatgcaatgcacccgggcaag 36
Query: 67 gatt 70
||||
Sbjct: 35 gatt 32
>33406_bta-mir-502a-2:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 tgcaatgcacctgggcaaggattc 71
||||||||||||||||||||||||
Sbjct: 55 tgcaatgcacctgggcaaggattc 78
