miRNEST 2.0, an integrative microRNA resource :: BLAST
>27213_eca-mir-502:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tgctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacct 60
Query: 61 gggcaaggattcagagaggg 80
||||||||||||||||||||
Sbjct: 61 gggcaaggattcagagaggg 80
>31042_ppy-mir-502:mirbase
Length = 86
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tgctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacct 60
Query: 61 gggcaaggattcagagaggg 80
||||||||||||||||||||
Sbjct: 61 gggcaaggattcagagaggg 80
>31043_ppy-mir-502:mirbase
Length = 86
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tgctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacct 60
Query: 61 gggcaaggattcagagaggg 80
||||||||||||||||||||
Sbjct: 61 gggcaaggattcagagaggg 80
>28698_hsa-mir-502:mirbase
Length = 86
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tgctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacct 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgctccccctctctaatccttgctatctgggtgctagtgctggctcaatgcaatgcacct 60
Query: 61 gggcaaggattcagagaggg 80
||||||||||||||||||||
Sbjct: 61 gggcaaggattcagagaggg 80
>28699_hsa-mir-502:mirbase
Length = 86
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tgctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacct 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tgctccccctctctaatccttgctatctgggtgctagtgctggctcaatgcaatgcacct 60
Query: 61 gggcaaggattcagagaggg 80
||||||||||||||||||||
Sbjct: 61 gggcaaggattcagagaggg 80
>30406_ptr-mir-502:mirbase
Length = 85
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctatctgggtgctagtgctggctcaatgcaatgcacctg 60
Query: 62 ggcaaggattcagagaggg 80
|||||||||||||||||||
Sbjct: 61 ggcaaggattcagagaggg 79
>27943_mml-mir-502:mirbase
Length = 80
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 7 ccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaa 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaa 60
Query: 67 ggattcagagaggg 80
||||||||||||||
Sbjct: 61 ggattcagagaggg 74
>27944_mml-mir-502:mirbase
Length = 80
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 7 ccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaa 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaa 60
Query: 67 ggattcagagaggg 80
||||||||||||||
Sbjct: 61 ggattcagagaggg 74
>31041_ppy-mir-501:mirbase
Length = 78
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 8 cctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaag 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaag 60
Query: 68 gattcagagaggg 80
|||||||||||||
Sbjct: 61 gattcagagaggg 73
>32188_mmu-mir-500:mirbase
Length = 92
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 tgctccccctctctaatccttgctatctgggtgc-tagtgctgtctcaatgcaatgcacc 59
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 7 tgctccccctctctaatccttgctatctgggtgcttagtgctatctcaatgcaatgcacc 66
Query: 60 tgggcaaggattcagaga 77
||||||||| ||||||||
Sbjct: 67 tgggcaagggttcagaga 84
>33405_bta-mir-502a-1:mirbase
Length = 85
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 11 ctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaaggat 70
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 10 ctctaatccttgctctctgggtgctagtgctgtctccatgcaatgcacctgggcaaggat 69
Query: 71 tcagagaggg 80
||||||||||
Sbjct: 70 tcagagaggg 79
>26869_cfa-mir-502:mirbase
Length = 59
Score = 117 bits (59), Expect = 1e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 15 aatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaaggattca 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaaggattca 59
>32941_rno-mir-500:mirbase
Length = 80
Score = 115 bits (58), Expect = 5e-27
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 5 ccccctctctaatccttgctatctgggtgct-agtgctgtctcaatgcaatgcacctggg 63
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 1 ccccctctctaatccttgctatctgggtgcttagtgctatctcaatgcaatgcacctggg 60
Query: 64 caaggattcagaga 77
||||| ||||||||
Sbjct: 61 caagggttcagaga 74
>28694_hsa-mir-500a:mirbase
Length = 84
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
|||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgctgtctgaatgcaatgcacctg 60
Query: 62 ggcaaggattcagagag 78
||||||||||| |||||
Sbjct: 61 ggcaaggattctgagag 77
>31040_ppy-mir-500:mirbase
Length = 84
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
|||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgctgtctgaatgcaatgcacctg 60
Query: 62 ggcaaggattcagagag 78
||||||||||| |||||
Sbjct: 61 ggcaaggattctgagag 77
>27211_eca-mir-500-2:mirbase
Length = 84
Score = 109 bits (55), Expect = 3e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
|||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
Query: 62 ggcaaggattcagagaggg 80
||||||||||| |||||||
Sbjct: 61 ggcaaggattccgagaggg 79
>30403_ptr-mir-500:mirbase
Length = 83
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 3 ctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgg 62
||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||
Sbjct: 1 ctccccctctctaatccttgctacctgggtgagagtgctgtctgaatgcaatgcacctgg 60
Query: 63 gcaaggattc 72
||||||||||
Sbjct: 61 gcaaggattc 70
>27210_eca-mir-500:mirbase
Length = 84
Score = 105 bits (53), Expect = 5e-24
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
|||||||||||||||||||||||| ||||||| |||| ||||| |||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgttgtctgaatgcaatgcacctg 60
Query: 62 ggcaaggattcagagag 78
||||||||||| |||||
Sbjct: 61 ggcaaggattccgagag 77
>27941_mml-mir-500:mirbase
Length = 84
Score = 105 bits (53), Expect = 5e-24
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
|||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgctatctgaatgcaatgcacctg 60
Query: 62 ggcaaggattcagagag 78
||||||||||| |||||
Sbjct: 61 ggcaaggattctgagag 77
>33404_bta-mir-500:mirbase
Length = 84
Score = 105 bits (53), Expect = 5e-24
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
|||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||
Sbjct: 1 gctccccctctctaatccttgctacctgggtgagagtgctttctgaatgcaatgcacctg 60
Query: 62 ggcaaggattcagagag 78
||||||||||| |||||
Sbjct: 61 ggcaaggattctgagag 77
>34114_ssc-mir-500:mirbase
Length = 80
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 6 cccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggca 65
|||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||||
Sbjct: 1 cccctctctaatccttgctacctgggtgagagtgctgtgtgaatgcaatgcacctgggca 60
Query: 66 aggattcagagag 78
||||||| |||||
Sbjct: 61 aggattctgagag 73
>26868_cfa-mir-500:mirbase
Length = 59
Score = 75.8 bits (38), Expect = 4e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 15 aatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaaggattc 72
||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||
Sbjct: 1 aatccttgctacctgggtgagagtgctttctgaatgcaatgcacctgggcaaggattc 58
>30404_ptr-mir-500-2:mirbase
Length = 79
Score = 73.8 bits (37), Expect = 2e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 tccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctggg 63
|||||||||||||||||||||| ||||||| |||||| ||| |||||| |||||| ||
Sbjct: 1 tccccctctctaatccttgctacctgggtgagagtgctttctgaatgcagtgcacccagg 60
Query: 64 caaggattc 72
|||||||||
Sbjct: 61 caaggattc 69
>28695_hsa-mir-500b:mirbase
Length = 79
Score = 71.9 bits (36), Expect = 6e-14
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 5 ccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggc 64
||||||||||||||||||||| ||||||| |||||| ||| |||||| |||||| |||
Sbjct: 1 ccccctctctaatccttgctacctgggtgagagtgctttctgaatgcagtgcacccaggc 60
Query: 65 aaggattc 72
||||||||
Sbjct: 61 aaggattc 68
>28696_hsa-mir-501:mirbase
Length = 84
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 8 cctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaag 67
|||||||||||||| | ||||||| |||||| ||| ||||||||||||| |||||||
Sbjct: 7 cctctctaatcctttgtccctgggtgagagtgctttctgaatgcaatgcacccgggcaag 66
Query: 68 gattcagagaggg 80
||||| |||||||
Sbjct: 67 gattctgagaggg 79
>28697_hsa-mir-501:mirbase
Length = 84
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 8 cctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaag 67
|||||||||||||| | ||||||| |||||| ||| ||||||||||||| |||||||
Sbjct: 7 cctctctaatcctttgtccctgggtgagagtgctttctgaatgcaatgcacccgggcaag 66
Query: 68 gattcagagaggg 80
||||| |||||||
Sbjct: 67 gattctgagaggg 79
>30405_ptr-mir-501:mirbase
Length = 83
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 8 cctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaag 67
|||||||||||||| | ||||||| |||||| ||| ||||||||||||| |||||||
Sbjct: 6 cctctctaatcctttgtccctgggtgagagtgctttctgaatgcaatgcacccgggcaag 65
Query: 68 gattcagagaggg 80
||||| |||||||
Sbjct: 66 gattctgagaggg 78
>33406_bta-mir-502a-2:mirbase
Length = 90
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 40 ctgtctcaatgcaatgcacctgggcaaggattca 73
|||||||| |||||||||||||||||||||||||
Sbjct: 46 ctgtctcagtgcaatgcacctgggcaaggattca 79
>27212_eca-mir-501:mirbase
Length = 84
Score = 54.0 bits (27), Expect = 2e-08
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 2 gctccccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctg 61
|||| |||||||| |||||| | ||||||| |||||| || |||||||||||||||
Sbjct: 1 gctctccctctctcatccttcgtccctgggtgagagtgctttccgaatgcaatgcacctg 60
Query: 62 ggcaaggattc 72
|||||||||||
Sbjct: 61 ggcaaggattc 71
>27942_mml-mir-501:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 8 cctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggcaag 67
|||||||||||||| | ||||||| |||||| ||| |||||| |||||| ||||||
Sbjct: 7 cctctctaatcctttgtccctgggtgagagtgctttctgaatgcagtgcacccaggcaag 66
Query: 68 gattcagagaggg 80
||||| |||||||
Sbjct: 67 gattctgagaggg 79
>33407_bta-mir-502b:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 6 cccctctctaatccttgctatctgggtgctagtgctgtctcaatgcaatgcacctgggca 65
|||||||||||| |||||| | |||| |||||| | | |||||||| ||||||||||
Sbjct: 4 cccctctctaattcttgctccccaggtgagagtgctttgtgaatgcaatccacctgggca 63
Query: 66 aggattc 72
|||||||
Sbjct: 64 aggattc 70
>32189_mmu-mir-501:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 atgcaatgcacctgggcaaggatt 71
|||||||||||| |||||||||||
Sbjct: 57 atgcaatgcacccgggcaaggatt 80
>32190_mmu-mir-501:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 atgcaatgcacctgggcaaggatt 71
|||||||||||| |||||||||||
Sbjct: 57 atgcaatgcacccgggcaaggatt 80
>32942_rno-mir-501:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 atgcaatgcacctgggcaaggatt 71
|||||||||||| |||||||||||
Sbjct: 47 atgcaatgcacccgggcaaggatt 70
>33052_rno-mir-3560:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 48 atgcaatgcacctgggcaaggatt 71
|||||||||||| |||||||||||
Sbjct: 55 atgcaatgcacccgggcaaggatt 32
