miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00939;mir-504;AAGU02876574.1/450-367 9785:Loxodonta africana
(African savanna elephant)
Length = 84
Score = 135 bits (68), Expect = 1e-31
Identities = 81/84 (96%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 1 gctgctgttgggagaccctggtctgcactct-atctgtatgcttactgaagggagcgcag 59
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 1 gctgctgttgggagaccctggtctgcactcttatctgtatgcttactgaggggagagcag 60
Query: 60 ggcagggtttcccatacagagggc 83
||||||||||||||||||||||||
Sbjct: 61 ggcagggtttcccatacagagggc 84
>RF00939;mir-504;ABRQ01015424.1/1784-1702 9813:Procavia capensis
(cape rock hyrax)
Length = 83
Score = 69.9 bits (35), Expect = 5e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 5 ctgttgggagaccctggtctgcactctatctgtatgcttactgaagggagcgcagggcag 64
|||||||||||||||||||||| ||| |||||||||||| |||| || || |||| |||
Sbjct: 5 ctgttgggagaccctggtctgcgctcaatctgtatgcttcctgagggaagagcagtacag 64
Query: 65 ggtttcc 71
|||||||
Sbjct: 65 ggtttcc 71
