miRNEST 2.0, an integrative microRNA resource :: BLAST
>27993_mml-mir-543:mirbase
Length = 80
Score = 93.7 bits (47), Expect = 2e-20
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 1 cttaaggagaagttgcccgtgnnnnnnncgctttatttgtgacgaaacattcgcggtgca 60
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 cttaatgagaagttgcccgtgtctttttcgctttatttgtgacgaaacattcgcggtgca 64
Query: 61 cttctttttcag 72
||||||||||||
Sbjct: 65 cttctttttcag 76
>28791_hsa-mir-543:mirbase
Length = 78
Score = 93.7 bits (47), Expect = 2e-20
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 1 cttaaggagaagttgcccgtgnnnnnnncgctttatttgtgacgaaacattcgcggtgca 60
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3 cttaatgagaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgca 62
Query: 61 cttctttttcag 72
||||||||||||
Sbjct: 63 cttctttttcag 74
>31130_ppy-mir-543:mirbase
Length = 78
Score = 93.7 bits (47), Expect = 2e-20
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 1 cttaaggagaagttgcccgtgnnnnnnncgctttatttgtgacgaaacattcgcggtgca 60
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3 cttaatgagaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgca 62
Query: 61 cttctttttcag 72
||||||||||||
Sbjct: 63 cttctttttcag 74
>33414_bta-mir-543:mirbase
Length = 80
Score = 93.7 bits (47), Expect = 2e-20
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 1 cttaaggagaagttgcccgtgnnnnnnncgctttatttgtgacgaaacattcgcggtgca 60
||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 5 cttaaggagaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgca 64
Query: 61 cttctttttcag 72
||||||||||||
Sbjct: 65 cttctttttcag 76
>33868_oar-mir-543:mirbase
Length = 123
Score = 93.7 bits (47), Expect = 2e-20
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 1 cttaaggagaagttgcccgtgnnnnnnncgctttatttgtgacgaaacattcgcggtgca 60
||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 33 cttaaggagaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgca 92
Query: 61 cttctttttcag 72
||||||||||||
Sbjct: 93 cttctttttcag 104
>33869_oar-mir-543:mirbase
Length = 123
Score = 93.7 bits (47), Expect = 2e-20
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 1 cttaaggagaagttgcccgtgnnnnnnncgctttatttgtgacgaaacattcgcggtgca 60
||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 33 cttaaggagaagttgcccgtgtctttttcgctttatatgtgacgaaacattcgcggtgca 92
Query: 61 cttctttttcag 72
||||||||||||
Sbjct: 93 cttctttttcag 104
>30467_ptr-mir-543:mirbase
Length = 77
Score = 85.7 bits (43), Expect = 4e-18
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1 cttaaggagaagttgcccgtgnnnnnnncgctttatttgtgacgaaacattcgcggtgca 60
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2 cttaatgagaagttgcccgtgtttttttcgctttatttgtgacgaaacattcgcggtgca 61
Query: 61 cttctttttcag 72
|||||| |||||
Sbjct: 62 cttcttcttcag 73
>32208_mmu-mir-543:mirbase
Length = 76
Score = 79.8 bits (40), Expect = 2e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 29 cgctttatttgtgacgaaacattcgcggtgcacttctttttcag 72
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 31 cgctttatatgtgacgaaacattcgcggtgcacttctttttcag 74
>32954_rno-mir-543:mirbase
Length = 80
Score = 79.8 bits (40), Expect = 2e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 29 cgctttatttgtgacgaaacattcgcggtgcacttctttttcag 72
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 33 cgctttatatgtgacgaaacattcgcggtgcacttctttttcag 76
>26877_cfa-mir-543:mirbase
Length = 58
Score = 75.8 bits (38), Expect = 4e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 29 cgctttatttgtgacgaaacattcgcggtgcacttctt 66
||||||||||||||||||||||||||||||||||||||
Sbjct: 21 cgctttatttgtgacgaaacattcgcggtgcacttctt 58
>32937_rno-mir-495:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 32 tttatttgtgacgaaacattcgcggtgcacttctttttc 70
|||||||||||||||||| | ||||||||||||||||
Sbjct: 36 tttatttgtgacgaaacaaacatggtgcacttctttttc 74
>27935_mml-mir-495:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 29 cgctttatttgtgacgaaacattcgcggtgcacttctttttc 70
|||||||| |||||||||||| | ||||||||||||||||
Sbjct: 34 cgctttatatgtgacgaaacaaacatggtgcacttctttttc 75
>28686_hsa-mir-495:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 29 cgctttatttgtgacgaaacattcgcggtgcacttctttttc 70
|||||||| |||||||||||| | ||||||||||||||||
Sbjct: 34 cgctttatatgtgacgaaacaaacatggtgcacttctttttc 75
>30398_ptr-mir-495:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 1e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 29 cgctttatttgtgacgaaacattcgcggtgcacttctttttc 70
|||||||| |||||||||||| | ||||||||||||||||
Sbjct: 33 cgctttatatgtgacgaaacaaacatggtgcacttctttttc 74
>31034_ppy-mir-495:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 29 cgctttatttgtgacgaaacattcgcggtgcacttctttttc 70
|||||||| |||||||||||| | ||||||||||||||||
Sbjct: 31 cgctttatatgtgacgaaacaaacatggtgcacttctttttc 72
>32184_mmu-mir-495:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 8e-04
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 32 tttatttgtgacgaaacattcgcggtgcacttctt 66
|||||||||||||||||| | ||||||||||||
Sbjct: 29 tttatttgtgacgaaacaaacatggtgcacttctt 63
