miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01045;mir-544;AAWR02015439.1/5595-5698 9796:Equus caballus
(horse)
Length = 104
Score = 151 bits (76), Expect = 1e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 ggcatcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 ggcatcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctg 73
Query: 61 catttttaacaagttc 76
||||||||||||||||
Sbjct: 74 catttttaacaagttc 89
>RF00004;U2;AAPE01278870.1/15299-15082 59463:Myotis lucifugus
(little brown bat)
Length = 218
Score = 81.8 bits (41), Expect = 1e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 23 ttggattcagcaggtctgggatgaggcccaagattctgcatttttaacaagtt 75
|||||||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 217 ttggattcagtagatctgggatgaggcccaagatactgcatttttaacaagtt 165
>RF01045;mir-544;AAWR02010790.1/9060-8956 9796:Equus caballus
(horse)
Length = 105
Score = 73.8 bits (37), Expect = 3e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | ||||||| ||||||||| || |||||||||||||||||
Sbjct: 18 atcttgttaaaatgcagaatctgattcagtaggtctgggctggggcccaagattctgcat 77
Query: 64 ttttaacaagttc 76
|| || |||||||
Sbjct: 78 ttctagcaagttc 90
>RF01045;mir-544;ABRN01191765.1/2646-2543 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 104
Score = 73.8 bits (37), Expect = 3e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| |||||||| ||||||||| ||||||||| | || |||||||||||
Sbjct: 17 atcttgttaaaatgcagactttgattcagcaagtctgggatttgtcctgagattctgcat 76
Query: 64 ttttaacaagttc 76
|| ||||||||||
Sbjct: 77 ttctaacaagttc 89
>RF01045;mir-544;ABRN01168393.1/7262-7159 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 104
Score = 73.8 bits (37), Expect = 3e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 36 gtctgggatgaggcccaagattctgcatttttaacaagttc 76
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 49 gtctgggatggggcccaagattctgcatttttaacaagttc 89
>RF01045;mir-544;AAWR02008854.1/31936-32039 9796:Equus caballus
(horse)
Length = 104
Score = 61.9 bits (31), Expect = 1e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 27 attcagcaggtctgggatgaggcccaagattctgcatttttaacaag 73
|||||||||||||||| | ||||||||||||||||||| |||||||
Sbjct: 40 attcagcaggtctggggttgggcccaagattctgcatttctaacaag 86
>RF01045;mir-544;AAWR02036011.1/38956-39060 9796:Equus caballus
(horse)
Length = 105
Score = 60.0 bits (30), Expect = 4e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | ||||||||||||||||| || |||| |||||||||||
Sbjct: 18 atcttgttaaaatgcagattccgattcagcaggtctggggtggggcctgagattctgcat 77
Query: 64 tt 65
||
Sbjct: 78 tt 79
>RF01045;mir-544;AAWR02017706.1/42911-42807 9796:Equus caballus
(horse)
Length = 105
Score = 60.0 bits (30), Expect = 4e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| || ||||||||||||||||| || |||| ||| |||||||
Sbjct: 18 atcttgttaaaatgcagattttgattcagcaggtctggggtggggcctgagactctgcat 77
Query: 64 tt 65
||
Sbjct: 78 tt 79
>RF01045;mir-544;ABRN01359325.1/5746-5642 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 105
Score = 60.0 bits (30), Expect = 4e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | ||||||| ||||| ||||| ||||||||| |||||||
Sbjct: 18 atcttgttaaaatgcagattctgattcagtaggtcaaggatggggcccaagagtctgcat 77
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 78 ttctaacaag 87
>RF01045;mir-544;ABRN01102089.1/1630-1733 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 104
Score = 60.0 bits (30), Expect = 4e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
||||||||||| ||||| | |||||| ||||||||| || |||||||||||||||||
Sbjct: 17 atcttgttaaattgcagattctgattcatgaggtctggggtggggcccaagattctgcat 76
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 77 ttctaacaag 86
>RF01045;mir-544;ABRN01257058.1/14861-14758 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 104
Score = 60.0 bits (30), Expect = 4e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | | ||||| ||||||||| || |||||||||||||||||
Sbjct: 18 atcttgttaaaatgcagattctgtttcagtaggtctggg-tggggcccaagattctgcat 76
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 77 ttctaacaag 86
>RF01045;mir-544;ABRN01308363.1/14112-14007 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 106
Score = 58.0 bits (29), Expect = 2e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 6 cttgttaaaacgcagacttg-gattcagcaggtctgggatgaggcccaagattctgcatt 64
||||||||| |||||||| ||||||| ||||||||| || ||||||||||||||||||
Sbjct: 20 cttgttaaactgcagacttctgattcagtaggtctgggttggggcccaagattctgcatt 79
Query: 65 t 65
|
Sbjct: 80 t 80
>RF01045;mir-544;ABRN01338791.1/9803-9907 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 105
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1 ggcatcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctg 60
||||||||||||||| ||||| | |||||| |||||||| || | ||||||||||||
Sbjct: 15 ggcatcttgttaaaatgcagattcttattcagtaggtctggaataggacccaagattctg 74
Query: 61 catttttaacaag 73
||||| |||||||
Sbjct: 75 catttctaacaag 87
>RF01045;mir-544;AAGU02012375.1/3016-3120 9785:Loxodonta africana
(African savanna elephant)
Length = 105
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1 ggcatcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctg 60
||||||||||||||| | ||| | ||||||| | |||| || || |||| |||||||||
Sbjct: 15 ggcatcttgttaaaaagtagattctgattcagtaagtctagggtggggcctaagattctg 74
Query: 61 catttttaacaag 73
|||||||||||||
Sbjct: 75 catttttaacaag 87
>RF01045;mir-544;AAGU02432581.1/3065-2961 9785:Loxodonta africana
(African savanna elephant)
Length = 105
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 5 tcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcatt 64
||||||||||| ||||| | ||| ||||||||||||| ||| ||| ||||||||||||
Sbjct: 19 tcttgttaaaatgcagattctgatgcagcaggtctggggtgaagccgcagattctgcatt 78
Query: 65 tttaacaag 73
| |||||||
Sbjct: 79 tctaacaag 87
>RF01045;mir-544;AAWR02035132.1/964-863 9796:Equus caballus
(horse)
Length = 102
Score = 54.0 bits (27), Expect = 3e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | ||||||||||||||||| || |||| |||||||||||
Sbjct: 17 atcttgttaaaatgcagattctgattcagcaggtctggg-tggggcctgagattctgcat 75
Query: 64 ttt 66
|||
Sbjct: 76 ttt 78
>RF01045;mir-544;AAGV020681461.1/516-412 9361:Dasypus novemcinctus
(nine-banded armadillo)
Length = 105
Score = 52.0 bits (26), Expect = 1e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | | ||||||||||||| | || ||||||| ||||||||
Sbjct: 18 atcttgttaaaatgcagattctggttcagcaggtctgaggtggagcccaaggttctgcat 77
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 78 ttctaacaag 87
>RF01045;mir-544;AAWR02036114.1/1356-1253 9796:Equus caballus
(horse)
Length = 104
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgg 41
|||||||||||| |||||||| ||||||| ||||||||
Sbjct: 18 atcttgttaaaatgcagactttgattcagtaggtctgg 55
>RF01045;mir-544;ABRN01325627.1/6610-6714 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 105
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 36 gtctgggatgaggcccaagattctgcatttttaacaag 73
|||||||| |||||||||||||||||||| |||||||
Sbjct: 50 gtctgggacaaggcccaagattctgcatttctaacaag 87
>RF01045;mir-544;ABRT010478411.1/627-731 9478:Tarsius syrichta
(Philippine tarsier)
Length = 105
Score = 52.0 bits (26), Expect = 1e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | |||||| |||||||||| || | || |||| |||||||
Sbjct: 18 atcttgttaaaatgcagattctgattcaacaggtctggggtgggacctaagactctgcat 77
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 78 ttctaacaag 87
>RF01045;mir-544;AANU01293535.1/10564-10461 9544:Macaca mulatta
(rhesus monkey)
Length = 104
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | ||||||||||| || |||||||||| |||||||||||
Sbjct: 18 atcttgttaaaatgcagattctgattcagcaggact-ggatgaggcctgagattctgcat 76
Query: 64 tt 65
||
Sbjct: 77 tt 78
>RF01045;mir-544;AAGW01172768.1/238-341 9986:Oryctolagus cuniculus
(rabbit)
Length = 104
Score = 52.0 bits (26), Expect = 1e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | |||||||||||||| || | || ||||||||||||||
Sbjct: 18 atcttgttaaaatgcagattctgattcagcaggtct-ggcttcgggccaagattctgcat 76
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 77 ttctaacaag 86
>RF01045;mir-544;AAGU02742659.1/1061-1165 9785:Loxodonta africana
(African savanna elephant)
Length = 105
Score = 52.0 bits (26), Expect = 1e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| | ||| | ||||||| ||||||| | ||| |||| |||||||||||
Sbjct: 18 atcttgttaaaatgtagattctgattcagtaggtctgtggtgaagcccgagattctgcat 77
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 78 ttctaacaag 87
>RF01045;mir-544;ABVD01193351.1/1399-1503 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 105
Score = 50.1 bits (25), Expect = 4e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 7 ttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcatttt 66
||||||||| ||||| | | ||||| ||||| ||| || |||||||||||||||||||
Sbjct: 21 ttgttaaaatgcagattctgcttcagtaggtcaggggtggggcccaagattctgcatttc 80
Query: 67 taaca 71
|||||
Sbjct: 81 taaca 85
>RF01045;mir-544;AAWR02015487.1/135741-135638 9796:Equus caballus
(horse)
Length = 104
Score = 50.1 bits (25), Expect = 4e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 5 tcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcatt 64
||||||||||| ||||| | ||||||| |||||||| ||||||| ||| ||||||||
Sbjct: 18 tcttgttaaaatgcagattctgattcagtaggtctggagtgaggcctgagagtctgcatt 77
Query: 65 tttaacaag 73
| |||||||
Sbjct: 78 tctaacaag 86
>RF01045;mir-544;AAWR02031117.1/1793-1897 9796:Equus caballus
(horse)
Length = 105
Score = 50.1 bits (25), Expect = 4e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 9 gttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcattttta 68
||||||| ||||| | ||||||| | |||||||||| |||| ||||||||||||| ||
Sbjct: 23 gttaaaatgcagattctgattcagtaagtctgggatggggcctgagattctgcatttcta 82
Query: 69 acaag 73
|||||
Sbjct: 83 acaag 87
>RF01045;mir-544;AAWR02010671.1/220629-220525 9796:Equus caballus
(horse)
Length = 105
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 45 gaggcccaagattctgcatttttaacaag 73
||||||||||||||||||||| |||||||
Sbjct: 59 gaggcccaagattctgcatttctaacaag 87
>RF01045;mir-544;ABVD01029342.1/1397-1500 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 26 gattcagcaggtctgggatgaggcccaagattctgcattt 65
||||||| |||||||||||| || ||||||||||||||||
Sbjct: 40 gattcagtaggtctgggatg-gggccaagattctgcattt 78
>RF01045;mir-544;ABVD01400099.1/2764-2868 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 34 aggtctgggatgaggcccaagattctgcattt 65
||||||||||||||||| |||||||||||||
Sbjct: 48 aggtctgggatgaggcctgagattctgcattt 79
>RF01045;mir-544;ABRN01189417.1/4268-4372 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 6 cttgttaaaacgcagacttggattcagcaggtctgggatg 45
|||||||||| ||||| | ||||||||||||||||||||
Sbjct: 20 cttgttaaaatgcagattctgattcagcaggtctgggatg 59
>RF01045;mir-544;ABRN01422716.1/13279-13176 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggccc 51
|||||||||||| ||||| | ||||||||||||||||| |||||||
Sbjct: 17 atcttgttaaaatgcagattctgattcagcaggtctggggagaggccc 64
>RF01045;mir-544;AANG01459743.1/677-574 9685:Felis catus (domestic
cat)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 46 aggcccaagattctgcatttttaacaag 73
||||| ||||||||||||||||||||||
Sbjct: 59 aggcctaagattctgcatttttaacaag 86
>RF01045;mir-544;AAQR01526579.1/2238-2134 30611:Otolemur garnettii
(small-eared galago)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | |||||||||||||||| ||| |||| || || |||||
Sbjct: 18 atcttgttaaaatgcagattctgattcagcaggtctggtatggggcctgaggttttgcat 77
Query: 64 ttttaaca 71
|| |||||
Sbjct: 78 ttctaaca 85
>RF01045;mir-544;ABVD01794195.1/1316-1418 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 103
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 ggcccaagattctgcatttttaacaag 73
||||||||||||||||||| |||||||
Sbjct: 59 ggcccaagattctgcatttctaacaag 85
>RF01045;mir-544;ABVD01161883.1/1216-1121 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 96
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 ggcccaagattctgcatttttaacaag 73
||||||||||||||||||| |||||||
Sbjct: 52 ggcccaagattctgcatttctaacaag 78
>RF01045;mir-544;AAWR02011443.1/6456-6353 9796:Equus caballus
(horse)
Length = 104
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 ggcccaagattctgcatttttaacaag 73
||||| |||||||||||||||||||||
Sbjct: 60 ggccctagattctgcatttttaacaag 86
>RF01045;mir-544;ABRN01376082.1/22570-22674 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 105
Score = 46.1 bits (23), Expect = 6e-05
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgca 62
|||||||||||| | ||| | ||||||| ||||||||| ||| | |||||||||||||
Sbjct: 18 atcttgttaaaatgtagattctgattcagtaggtctggggtgaagtccaagattctgca 76
>RF01045;mir-544;AANG01804177.1/2485-2588 9685:Felis catus
(domestic cat)
Length = 104
Score = 46.1 bits (23), Expect = 6e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 27 attcagcaggtctgggatgaggcccaagattctgcatttttaacaag 73
|||||| |||||||| || |||||| |||||||||||| |||||||
Sbjct: 40 attcagtaggtctggagtggggcccaggattctgcatttctaacaag 86
>RF01045;mir-544;AAEX02019639.1/153692-153782 9615:Canis lupus
familiaris (dog)
Length = 91
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 ccaagattctgcatttttaacaagttc 76
||||||||||||||||||| |||||||
Sbjct: 50 ccaagattctgcatttttagcaagttc 76
>RF01045;mir-544;AAEX02021676.1/56731-56627 9615:Canis lupus
familiaris (dog)
Length = 105
Score = 46.1 bits (23), Expect = 6e-05
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
||||||||||| ||||| | ||||||| ||||||||| | ||||| |||| |||||||
Sbjct: 18 atcttgttaaattgcagattctgattcagtaggtctggggtaaggcctaagagtctgcat 77
Query: 64 ttttaac 70
|| ||||
Sbjct: 78 ttctaac 84
>RF01045;mir-544;ABGA01258758.1/5381-5277 9601:Pongo abelii
(Sumatran orangutan)
Length = 105
Score = 46.1 bits (23), Expect = 6e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctggg 42
|||||||||||| |||||||| ||||||| ||| |||||
Sbjct: 18 atcttgttaaaatgcagactttgattcagaagggctggg 56
>RF01045;mir-544;AANU01117244.1/12251-12148 9544:Macaca mulatta
(rhesus monkey)
Length = 104
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 ccaagattctgcatttttaacaagttc 76
|||||||||||||||| ||||||||||
Sbjct: 63 ccaagattctgcatttctaacaagttc 89
>RF01045;mir-544;AAGW01206554.1/2672-2762 9986:Oryctolagus
cuniculus (rabbit)
Length = 91
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 ccaagattctgcatttttaacaagttc 76
||||||||||||||||||| |||||||
Sbjct: 50 ccaagattctgcatttttagcaagttc 76
>RF01045;mir-544;AAGU02380875.1/2019-2122 9785:Loxodonta africana
(African savanna elephant)
Length = 104
Score = 46.1 bits (23), Expect = 6e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctggg 42
|||||||||||| ||||||| | |||||||||||||||
Sbjct: 18 atcttgttaaaatgcagactctgtttcagcaggtctggg 56
>RF01045;mir-544;ABRQ01218848.1/1459-1355 9813:Procavia capensis
(cape rock hyrax)
Length = 105
Score = 46.1 bits (23), Expect = 6e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 26 gattcagcaggtctgggatgaggcccaagattctgcatttttaacaa 72
|||||||||||||| || ||||||| ||| ||||||||| ||||||
Sbjct: 40 gattcagcaggtctagggtgaggcctgagagtctgcatttctaacaa 86
>RF01045;mir-544;ABVD01352162.1/1349-1245 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctggg-atgaggcccaagattctgca 62
|||||||||||| ||||| | ||||||| ||||||||| ||||| | | |||||||||
Sbjct: 18 atcttgttaaaatgcagattctgattcagtaggtctggggatgagtctga-gattctgca 76
Query: 63 tttttaacaa 72
||||||||||
Sbjct: 77 tttttaacaa 86
>RF01045;mir-544;ABVD01946295.1/225-328 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 104
Score = 44.1 bits (22), Expect = 2e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | |||||||| | |||||||| || | |||||||||||
Sbjct: 17 atcttgttaaaatgcagattctgattcagctgatctgggatcctgctcgagattctgcat 76
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 77 ttctaacaag 86
>RF01045;mir-544;ABVD01034797.1/2391-2288 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 104
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 47 ggcccaagattctgcatttttaacaagttc 76
||||| ||||||||||||| ||||||||||
Sbjct: 60 ggcccgagattctgcatttctaacaagttc 89
>RF01045;mir-544;AAGV020092497.1/2496-2598 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 103
Score = 44.1 bits (22), Expect = 2e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 26 gattcagcaggtctgggatgaggcccaagattctgcatttttaaca 71
|||||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 39 gattcagccagtctgggatccagcccgagattctgcatttttaaca 84
>RF01045;mir-544;AAWR02009152.1/21006-20902 9796:Equus caballus
(horse)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| |||| | ||||||| |||||| ||||||||| |||||||||||
Sbjct: 18 atcttgttaaaatacagattctgattcagtaggtctaggatgaggcttgagattctgcat 77
Query: 64 tt 65
||
Sbjct: 78 tt 79
>RF01045;mir-544;AAWR02008212.1/6350-6246 9796:Equus caballus
(horse)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| || || | |||||||||| |||||| || | ||||||| |||| ||
Sbjct: 18 atcttgttaaaatgctgattctgattcagcagatctggggtgggacccaagaatctgaat 77
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 78 ttctaacaag 87
>RF01045;mir-544;AAWR02023395.1/57837-57941 9796:Equus caballus
(horse)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
||||||| |||| ||||| | ||| ||| ||||||||| | ||||||||| |||||||
Sbjct: 18 atcttgtcaaaatgcagattctgatccagtaggtctggggaggggcccaagactctgcat 77
Query: 64 ttttaa 69
||||||
Sbjct: 78 ttttaa 83
>RF01045;mir-544;AAWR02008734.1/139058-139161 9796:Equus caballus
(horse)
Length = 104
Score = 44.1 bits (22), Expect = 2e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | || ||||||||||||| || |||| ||| |||||||
Sbjct: 18 atcttgttaaaatgcagagtctgaggcagcaggtctggg-tggggcctgagactctgcat 76
Query: 64 ttttaacaag 73
||||||||||
Sbjct: 77 ttttaacaag 86
>RF01045;mir-544;ABRP01101571.1/6255-6357 132908:Pteropus vampyrus
(large flying fox)
Length = 103
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 38 ctgggatgaggcccaagattctgcatttttaaca 71
||||| |||||||| ||||||||||||| |||||
Sbjct: 51 ctggggtgaggcccgagattctgcatttctaaca 84
>RF01045;mir-544;AAFC03096318.1/87667-87771 9913:Bos taurus
(cattle)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | ||||||| ||||||||| ||| || |||||||||||
Sbjct: 18 atcttgttaaaatgcagattctgattcagtaggtctggggtgaaccctgagattctgcat 77
Query: 64 ttttaacaag 73
| |||||||
Sbjct: 78 ctctaacaag 87
>RF01045;mir-544;ACBE01044050.1/7602-7705 9685:Felis catus
(domestic cat)
Length = 104
Score = 44.1 bits (22), Expect = 2e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | ||||||| || |||||| || ||| ||||||||||||
Sbjct: 18 atcttgttaaaatgcagattctgattcagtag-tctggggtggagcctaagattctgcat 76
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 77 ttctaacaag 86
>RF01045;mir-544;AAPY01670964.1/501-392 37347:Tupaia belangeri
(northern tree shrew)
Length = 110
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 gaggcccaagattctgcatttttaac 70
||||||||||||||||||||| ||||
Sbjct: 64 gaggcccaagattctgcatttctaac 89
>RF01045;mir-544;AAPY01824234.1/1936-1833 37347:Tupaia belangeri
(northern tree shrew)
Length = 104
Score = 44.1 bits (22), Expect = 2e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | ||||||| ||| |||| | | |||||| ||||||||||
Sbjct: 18 atcttgttaaaatgcagattctgattcagtagggctggcacggggccca-gattctgcat 76
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 77 ttctaacaag 86
>RF01045;mir-544;ABDC01337241.1/2006-1902 30608:Microcebus murinus
(gray mouse lemur)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| | ||| || |||| | |||||||| || ||||| ||||||| |||
Sbjct: 18 atcttgttaaaatgaagattttgatttaaaaggtctggaataaggcctgagattcttcat 77
Query: 64 ttttaacaag 73
||||||||||
Sbjct: 78 ttttaacaag 87
>RF01045;mir-544;ABDC01321124.1/3814-3711 30608:Microcebus murinus
(gray mouse lemur)
Length = 104
Score = 44.1 bits (22), Expect = 2e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | | ||||| ||||||||| || | ||||||| ||||||
Sbjct: 17 atcttgttaaaatgcagattctgtttcagtaggtctggggtgctgtccaagatcctgcat 76
Query: 64 ttttaacaag 73
|| |||||||
Sbjct: 77 ttctaacaag 86
>RF01045;mir-544;CABD01023801.1/966-1070 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatg 45
|||||||||| | ||||| || ||||||||||||||| ||||
Sbjct: 18 atcttgttaagatgcagattttgattcagcaggtctgagatg 59
>RF01045;mir-544;AAQQ01638897.1/2646-2750 43179:Spermophilus
tridecemlineatus (thirteen-lined ground squirrel)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 48 gcccaagattctgcatttttaacaag 73
|||||||||||||||||| |||||||
Sbjct: 62 gcccaagattctgcatttctaacaag 87
>RF01045;mir-544;AAGU02024046.1/3255-3359 9785:Loxodonta africana
(African savanna elephant)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 36 gtctgggatgaggcccaagattctgcatttttaacaag 73
|||||||||| |||| ||||||||||||| |||||||
Sbjct: 50 gtctgggatggggcctgagattctgcatttctaacaag 87
>RF01045;mir-544;AAGU02160683.1/1657-1554 9785:Loxodonta africana
(African savanna elephant)
Length = 104
Score = 44.1 bits (22), Expect = 2e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| |||||||||| || | || |||| || | ||||| |||||
Sbjct: 18 atcttgttaaaatgcagatttggattcagtagatttgagatggagctc-agattttgcat 76
Query: 64 ttttaacaag 73
||||||||||
Sbjct: 77 ttttaacaag 86
>RF01045;mir-544;AAGU02008169.1/2145-2039 9785:Loxodonta africana
(African savanna elephant)
Length = 107
Score = 44.1 bits (22), Expect = 2e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 28 ttcagcaggtctgggatgaggcccaagattctgcatttttaacaag 73
||||| ||||||||| || |||| ||||||||||||| |||||||
Sbjct: 44 ttcagaaggtctgggctggggccagagattctgcatttctaacaag 89
>RF01045;mir-544;AAGU02103250.1/13661-13765 9785:Loxodonta
africana (African savanna elephant)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 47 ggcccaagattctgcatttttaacaagttc 76
|||| |||||||||||||| ||||||||||
Sbjct: 61 ggcctaagattctgcatttctaacaagttc 90
>RF01045;mir-544;AAGV020030287.1/3772-3668 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggat 44
|||||||||||| ||||| | ||||||| |||||||||||
Sbjct: 18 atcttgttaaaatgcagattctgattcagtaggtctgggat 58
>RF01045;mir-544;AAGV020125040.1/1121-1017 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 36 gtctgggatgaggcccaagattctgcatttttaacaagttc 76
||||||| || |||| ||||||||||||| ||||||||||
Sbjct: 50 gtctggggtggggcctgagattctgcatttctaacaagttc 90
>RF01045;mir-544;AAGV020263249.1/25-127 9361:Dasypus novemcinctus
(nine-banded armadillo)
Length = 103
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 49 cccaagattctgcatttttaacaag 73
||||||||||||||||| |||||||
Sbjct: 61 cccaagattctgcatttctaacaag 85
>RF01045;mir-544;AAWR02014281.1/14498-14602 9796:Equus caballus
(horse)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 26 gattcagcaggtctgggatgaggcccaagattctgcatttttaac 70
|||| |||||||||||| || |||| ||||||||||||| ||||
Sbjct: 40 gattaagcaggtctggggtggggcctgagattctgcatttctaac 84
>RF01045;mir-544;AAWR02026296.1/25893-25790 9796:Equus caballus
(horse)
Length = 104
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcagg 36
|||||||||||||||||| | |||||||||||
Sbjct: 18 atcttgttaaaacgcagattctgattcagcagg 50
>RF01045;mir-544;AAPE01552910.1/4940-4836 59463:Myotis lucifugus
(little brown bat)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 5 tcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcatt 64
||||||||||| ||||| | |||| || ||||||||| | || | ||| |||||||||
Sbjct: 19 tcttgttaaaatgcagattctgatttagtaggtctgggtggtgggctaagcttctgcatt 78
Query: 65 tttaacaag 73
|||||||||
Sbjct: 79 tttaacaag 87
>RF01045;mir-544;ABRP01185215.1/8217-8319 132908:Pteropus vampyrus
(large flying fox)
Length = 103
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 agattctgcatttttaacaag 73
|||||||||||||||||||||
Sbjct: 65 agattctgcatttttaacaag 85
>RF01045;mir-544;ABRN01353113.1/2596-2494 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 103
Score = 42.1 bits (21), Expect = 0.001
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 6 cttgttaaaacgcagacttggattcagcaggtctggg 42
|||||||||| ||||| | |||||||||||||||||
Sbjct: 20 cttgttaaaatgcagattctgattcagcaggtctggg 56
>RF01045;mir-544;AAQR01446941.1/1678-1574 30611:Otolemur garnettii
(small-eared galago)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 agattctgcatttttaacaag 73
|||||||||||||||||||||
Sbjct: 67 agattctgcatttttaacaag 87
>RF01045;mir-544;AANU01264296.1/1884-1780 9544:Macaca mulatta
(rhesus monkey)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | | ||||||| |||| ||||| ||| ||||||||||
Sbjct: 18 atcttgttaaaatgcagattctgtttcagcaagtctaggatggagcctcggattctgcat 77
Query: 64 ttttaacaagttc 76
|| ||||||||||
Sbjct: 78 ttctaacaagttc 90
>RF01045;mir-544;AANU01287927.1/3902-3800 9544:Macaca mulatta
(rhesus monkey)
Length = 103
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 agattctgcatttttaacaag 73
|||||||||||||||||||||
Sbjct: 66 agattctgcatttttaacaag 86
>RF01045;mir-544;AANU01244647.1/14902-15006 9544:Macaca mulatta
(rhesus monkey)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 caagattctgcatttttaacaagtt 75
||||||||||||||||| |||||||
Sbjct: 65 caagattctgcatttttgacaagtt 89
>RF01045;mir-544;AANU01267820.1/16730-16626 9544:Macaca mulatta
(rhesus monkey)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 29 tcagcaggtctgggatgaggcccaagattctgcatttttaacaag 73
|||| ||||||||||||||||| |||||||| || |||| ||||
Sbjct: 43 tcagtaggtctgggatgaggcctgagattctgtatatttagcaag 87
>RF01045;mir-544;AANU01096553.1/20457-20561 9544:Macaca mulatta
(rhesus monkey)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | || | || ||||||||||| ||| |||||||||||
Sbjct: 18 atcttgttaaaatgcagattctgacttaggaggtctgggatagagcctgagattctgcat 77
Query: 64 ttttaacaagttc 76
|||||||| ||||
Sbjct: 78 ttttaacaggttc 90
>RF01045;mir-544;ABRO01048692.1/2244-2141 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 104
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 gaggcccaagattctgcattt 65
|||||||||||||||||||||
Sbjct: 58 gaggcccaagattctgcattt 78
>RF01045;mir-544;AAGU02047730.1/2320-2424 9785:Loxodonta africana
(African savanna elephant)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggatgaggcccaagattctgcat 63
|||||||||||| ||||| | | ||||| |||||||||||| |||| |||||||| |
Sbjct: 18 atcttgttaaaaagcagattctggttcagtaggtctgggatggggcctgggattctgctt 77
Query: 64 ttttaacaagttc 76
| ||||||||||
Sbjct: 78 tgataacaagttc 90
>RF01045;mir-544;AAGU02235970.1/5720-5616 9785:Loxodonta africana
(African savanna elephant)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 ttctgcatttttaacaagttc 76
|||||||||||||||||||||
Sbjct: 70 ttctgcatttttaacaagttc 90
>RF01045;mir-544;AAGU02613088.1/945-1049 9785:Loxodonta africana
(African savanna elephant)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 4 atcttgttaaaacgcagacttggattcagcaggtctgggat 44
|||||||||| | ||||||| ||||||| |||||||||||
Sbjct: 18 atcttgttaatatgcagactctgattcaggaggtctgggat 58
