miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00892;mir-551;AAGV020839576.1/977-1062 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 86
Score = 103 bits (52), Expect = 2e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 tggaaatccagagtgggtgaggcctgtctgaccatttctaggcgacccactcttggtttc 60
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 13 tggaaatccagagtgggtgaggcctgtctgaccctttctaggcgacccattcttggtttc 72
>RF00892;mir-551;AAGU02438627.1/1313-1227 9785:Loxodonta africana
(African savanna elephant)
Length = 87
Score = 103 bits (52), Expect = 2e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 tggaaatccagagtgggtgaggcctgtctgaccatttctaggcgacccactcttggtttc 60
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 13 tggaaatccagagtgggtgaggcctgtctgaccctttctaggcgacccattcttggtttc 72
>RF00892;mir-551;AADC01000147.1/1258-1173 9606:Homo sapiens
(human)
Length = 86
Score = 99.6 bits (50), Expect = 4e-21
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 1 tggaaatccagagtgggtgaggcctgtctgaccatttctaggcgacccactcttggtttc 60
||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||
Sbjct: 13 tggaaatccagagtgggtggggccagtctgaccgtttctaggcgacccactcttggtttc 72
Query: 61 ca 62
||
Sbjct: 73 ca 74
>RF00892;mir-551;AAQR01640449.1/259-174 30611:Otolemur garnettii
(small-eared galago)
Length = 86
Score = 91.7 bits (46), Expect = 9e-19
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 tggaaatccagagtgggtgaggcctgtctgaccatttctaggcgacccactcttggtttc 60
|||||||||||||||||||||||||||||| || |||| ||||||||||||| |||||||
Sbjct: 13 tggaaatccagagtgggtgaggcctgtctggccgtttccaggcgacccactcatggtttc 72
Query: 61 ca 62
||
Sbjct: 73 ca 74
>RF00892;mir-551;AAFC03055164.1/49690-49606 9913:Bos taurus
(cattle)
Length = 85
Score = 63.9 bits (32), Expect = 2e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 3 gaaatccagagtgggtgaggcctgtctgaccatttctaggcgacccactcttggtttcca 62
|||| |||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||
Sbjct: 14 gaaacccagagcaggtgaggcctgtctgactgtttctgggcgacccaatcttggtttcca 73
>RF00892;mir-551;ABRP01278016.1/3192-3109 132908:Pteropus vampyrus
(large flying fox)
Length = 84
Score = 50.1 bits (25), Expect = 3e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 3 gaaatccagagtgggtgaggcctgtctgaccatttctaggcgacccact 51
|||| ||||||||| |||||||||||||| | | |||||| ||||||||
Sbjct: 14 gaaacccagagtggctgaggcctgtctgagcgtctctaggtgacccact 62
>RF00892;mir-551;AAFR03065316.1/1308-1223 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 86
Score = 48.1 bits (24), Expect = 1e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 1 tggaaatccagagtgggtgaggcctgtctgaccatttctaggcgacccactcttggtttc 60
|||||||||||| ||||| |||||| ||| ||||||||||||||| ||||||||||
Sbjct: 13 tggaaatccagaaggggtggagcctgttggacagtttctaggcgacccattcttggtttc 72
