miRNEST 2.0, an integrative microRNA resource :: BLAST
>27238_eca-mir-590:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 caatcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caatcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttat 60
Query: 61 gtataagctagtctctgattg 81
|||||||||||||||||||||
Sbjct: 61 gtataagctagtctctgattg 81
>26887_cfa-mir-590:mirbase
Length = 61
Score = 113 bits (57), Expect = 2e-26
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 12 gagcttattcataaaagtacagtataatccagtaaacctgtaattttatgtataagctag 71
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcttattcataaaagtacagtatgatccagtaaacctgtaattttatgtataagctag 60
Query: 72 t 72
|
Sbjct: 61 t 61
>31563_oan-mir-590:mirbase
Length = 122
Score = 97.6 bits (49), Expect = 1e-21
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 1 caatcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttat 60
|||||||||| |||||||| |||||||||||||||| || |||||||||||| ||||||
Sbjct: 20 caatcagaaatgagcttatccataaaagtacagtatcgtc-agtaaacctgtacttttat 78
Query: 61 gtataagctagtctctgattg 81
| |||||||||||||||||||
Sbjct: 79 ggataagctagtctctgattg 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 1 caatcagaaacgagcttattcataaaagtacag 33
|||||||| || ||||||| |||||||||||||
Sbjct: 99 caatcagagactagcttatccataaaagtacag 67
>28905_hsa-mir-590:mirbase
Length = 97
Score = 91.7 bits (46), Expect = 7e-20
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 4 tcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttatgta 63
||||||| |||||||||||||||||| |||||| | ||| || |||||||||||||||
Sbjct: 8 tcagaaatgagcttattcataaaagtgcagtatggtgaagtcaatctgtaattttatgta 67
Query: 64 taagctagtctctgattg 81
||||||||||||||||||
Sbjct: 68 taagctagtctctgattg 85
>28906_hsa-mir-590:mirbase
Length = 97
Score = 91.7 bits (46), Expect = 7e-20
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 4 tcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttatgta 63
||||||| |||||||||||||||||| |||||| | ||| || |||||||||||||||
Sbjct: 8 tcagaaatgagcttattcataaaagtgcagtatggtgaagtcaatctgtaattttatgta 67
Query: 64 taagctagtctctgattg 81
||||||||||||||||||
Sbjct: 68 taagctagtctctgattg 85
>30525_ptr-mir-590:mirbase
Length = 96
Score = 91.7 bits (46), Expect = 7e-20
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 4 tcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttatgta 63
||||||| |||||||||||||||||| |||||| | ||| || |||||||||||||||
Sbjct: 7 tcagaaatgagcttattcataaaagtgcagtatggtgaagtcaatctgtaattttatgta 66
Query: 64 taagctagtctctgattg 81
||||||||||||||||||
Sbjct: 67 taagctagtctctgattg 84
>31169_ppy-mir-590:mirbase
Length = 97
Score = 91.7 bits (46), Expect = 7e-20
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 4 tcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttatgta 63
||||||| |||||||||||||||||| |||||| | ||| || |||||||||||||||
Sbjct: 8 tcagaaatgagcttattcataaaagtgcagtatggtggagtcaatctgtaattttatgta 67
Query: 64 taagctagtctctgattg 81
||||||||||||||||||
Sbjct: 68 taagctagtctctgattg 85
>31170_ppy-mir-590:mirbase
Length = 97
Score = 91.7 bits (46), Expect = 7e-20
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 4 tcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttatgta 63
||||||| |||||||||||||||||| |||||| | ||| || |||||||||||||||
Sbjct: 8 tcagaaatgagcttattcataaaagtgcagtatggtggagtcaatctgtaattttatgta 67
Query: 64 taagctagtctctgattg 81
||||||||||||||||||
Sbjct: 68 taagctagtctctgattg 85
>32219_mmu-mir-590:mirbase
Length = 81
Score = 91.7 bits (46), Expect = 7e-20
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 4 tcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttatgta 63
||||||| |||||||||||||||||| |||||| | ||| || |||||||||||||||
Sbjct: 3 tcagaaatgagcttattcataaaagtgcagtatggtgaagtcaatctgtaattttatgta 62
Query: 64 taagctagtctctgattg 81
||||||||||||||||||
Sbjct: 63 taagctagtctctgattg 80
>32220_mmu-mir-590:mirbase
Length = 81
Score = 91.7 bits (46), Expect = 7e-20
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 4 tcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttatgta 63
||||||| |||||||||||||||||| |||||| | ||| || |||||||||||||||
Sbjct: 3 tcagaaatgagcttattcataaaagtgcagtatggtgaagtcaatctgtaattttatgta 62
Query: 64 taagctagtctctgattg 81
||||||||||||||||||
Sbjct: 63 taagctagtctctgattg 80
>28037_mml-mir-590:mirbase
Length = 97
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 4 tcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttatgta 63
||||||| |||||||||||||||||| |||||| | ||| | |||||||||||||||
Sbjct: 8 tcagaaatgagcttattcataaaagtgcagtatggtggagtcagtctgtaattttatgta 67
Query: 64 taagctagtctct 76
|||||| ||||||
Sbjct: 68 taagctggtctct 80
>28038_mml-mir-590:mirbase
Length = 97
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 4 tcagaaacgagcttattcataaaagtacagtataatccagtaaacctgtaattttatgta 63
||||||| |||||||||||||||||| |||||| | ||| | |||||||||||||||
Sbjct: 8 tcagaaatgagcttattcataaaagtgcagtatggtggagtcagtctgtaattttatgta 67
Query: 64 taagctagtctct 76
|||||| ||||||
Sbjct: 68 taagctggtctct 80
