miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00879;mir-615;ABRQ01001814.1/3563-3468 9813:Procavia capensis
(cape rock hyrax)
Length = 96
Score = 157 bits (79), Expect = 3e-38
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 4 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 62
Query: 64 cgagcctgggtctccctct 82
|||||||||||||||||||
Sbjct: 63 cgagcctgggtctccctct 81
>RF00879;mir-615;AAYZ01058781.1/113-208 9978:Ochotona princeps
(American pika)
Length = 96
Score = 101 bits (51), Expect = 2e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 4 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 63
|||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||
Sbjct: 3 cgggaggggcgggaggggggtccccggtgcccggacctcgagggtgctggccgttcggtc 62
Query: 64 cgagcctgggtctccctct 82
|||||||||||||| ||||
Sbjct: 63 cgagcctgggtctcactct 81
>RF00879;mir-615;AANN01223825.1/45-138 9365:Erinaceus europaeus
(western European hedgehog)
Length = 94
Score = 79.8 bits (40), Expect = 6e-15
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 4 cgggaggggcgggaggggggtccccggtgctcggatctcgagggtgcttattgttcggtc 63
||||| ||| || |||||| |||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 3 cgggaagggtggaagggggttccctggtgcacggatctcgagggtgctcattgttcggtt 62
Query: 64 cgagcctgggtctccc 79
|||||||||||||||
Sbjct: 63 tgagcctgggtctccc 78
