miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00872;mir-652;ABRQ01225516.1/4631-4728 9813:Procavia capensis
(cape rock hyrax)
Length = 98
Score = 186 bits (94), Expect = 4e-47
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 acgaatggctatgcactgcacaaccctaggagagggtgccattcacatagactataattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 acgaatggctatgcactgcacaaccctaggagagggtgccattcacatagactgtaattg 60
Query: 61 aatggcgccactagggttgtgcagtgcacaacctacac 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatggcgccactagggttgtgcagtgcacaacctacac 98
>RF00872;mir-652;ABRP01145045.1/4347-4444 132908:Pteropus vampyrus
(large flying fox)
Length = 98
Score = 135 bits (68), Expect = 1e-31
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 7 ggctatgcactgcacaaccctaggagagggtgccattcacatagactataattgaatggc 66
||||||| ||||||||||||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 7 ggctatgtactgcacaaccctaggaatgtgtgccattcacatagactaaaattgaatggc 66
Query: 67 gccactagggttgtgcagtgcacaacctacac 98
|||||||||||||||||||| |||||||||||
Sbjct: 67 gccactagggttgtgcagtgtacaacctacac 98
>RF00872;mir-652;AALT01529428.1/6713-6810 42254:Sorex araneus
(European shrew)
Length = 98
Score = 129 bits (65), Expect = 7e-30
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 19 cacaaccctaggagagggtgccattcacatagactataattgaatggcgccactagggtt 78
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 cacaaccctagtagatggtgccattcacatagactataattgaatggcgccactagggtt 78
Query: 79 gtgcagtgcacaaccta 95
|||||||||||| ||||
Sbjct: 79 gtgcagtgcacagccta 95
