miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00641;mir-154;AAGW01274484.1/944-1021 9986:Oryctolagus
cuniculus (rabbit)
Length = 78
Score = 129 bits (65), Expect = 5e-30
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 ctgaaataggttgcctgtgaggtgttcactttctatacgatgaatattatacagtcaacc 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6 ctgaaataggttgcctgtgaggtgttcactctctatacgatgaatattatacagtcaacc 65
Query: 61 tctttccgg 69
|||||||||
Sbjct: 66 tctttccgg 74
>RF00641;mir-154;ABRQ01054379.1/1286-1363 9813:Procavia capensis
(cape rock hyrax)
Length = 78
Score = 115 bits (58), Expect = 8e-26
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 8 aggttgcctgtgaggtgttcactttctatacgatgaatattatacagtcaacctctttcc 67
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13 aggttgcctgtgaggtgttcactttctatatgatgaatattatacagtcaacctctttcc 72
Query: 68 gg 69
||
Sbjct: 73 gg 74
