miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46600_miR156:micropc
          Length = 81

 Score = 75.8 bits (38), Expect = 8e-15
 Identities = 72/82 (87%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                       
Query: 33  gacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgttggga 92
           |||||||||||||||||||||||||| |   |||||||  ||||||||| ||||||||||
Sbjct: 1   gacagaagagagagagcacaacccgggaatggctaaag-gagtctttgcctttgttggga 59

                                 
Query: 93  gtgtgctttctcttcttctgtc 114
           ||||||  ||||||| ||||||
Sbjct: 60  gtgtgccctctcttcctctgtc 81




>45755_miR156:micropc
          Length = 77

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 68/78 (87%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                       
Query: 35  cagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgttgggagt 94
           |||||||||||||||||||||||| |   |||||||  ||||||||| ||||||||||||
Sbjct: 1   cagaagagagagagcacaacccgggaatggctaaag-gagtctttgcctttgttgggagt 59

                             
Query: 95  gtgctttctcttcttctg 112
           ||||  ||||||| ||||
Sbjct: 60  gtgccctctcttcctctg 77




>46205_miR157:micropc
          Length = 84

 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 73/85 (85%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                       
Query: 31  ttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgttgg 90
           ||||||||||| ||||||||||||||| |||  || ||||| | |||| ||   ||||||
Sbjct: 1   ttgacagaagaaagagagcacaacccgccattggccaaagaga-tcttcgccactgttgg 59

                                    
Query: 91  gagtgtgctttctcttcttctgtca 115
           ||||||||| |||||||||||||||
Sbjct: 60  gagtgtgctctctcttcttctgtca 84




>45433_miR156:micropc
          Length = 83

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 72/84 (85%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                       
Query: 32  tgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgttggg 91
           |||||||||| ||||||||||||||| |||  || ||||| | |||| ||   |||||||
Sbjct: 1   tgacagaagaaagagagcacaacccgccattggccaaagaga-tcttcgccactgttggg 59

                                   
Query: 92  agtgtgctttctcttcttctgtca 115
           |||||||| |||||||||||||||
Sbjct: 60  agtgtgctctctcttcttctgtca 83




>46380_miR157:micropc
          Length = 85

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 31 ttgacagaagagagagagcacaacccg 57
          |||||||||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagcacaacccg 27



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 83  tttgttgggagtgtgctttctcttcttctgtca 115
           ||||||||||||||||| |||  ||||||||||
Sbjct: 53  tttgttgggagtgtgctctctactcttctgtca 85




>45453_miR156:micropc
          Length = 77

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 66/78 (84%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                       
Query: 35  cagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgttgggagt 94
           ||||||| ||||||||||||||| |||  || ||||| | |||| ||   ||||||||||
Sbjct: 1   cagaagaaagagagcacaacccgccattggccaaagaga-tcttcgccactgttgggagt 59

                             
Query: 95  gtgctttctcttcttctg 112
           ||||| ||||||||||||
Sbjct: 60  gtgctctctcttcttctg 77




>45257_miR156:micropc
          Length = 84

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 32 tgacagaagagagagagcacaacccg 57
          ||||||||||||||||||||||||||
Sbjct: 1  tgacagaagagagagagcacaacccg 26



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 83  tttgttgggagtgtgctttctcttcttctgtca 115
           ||||||||||||||||| |||  ||||||||||
Sbjct: 52  tttgttgggagtgtgctctctactcttctgtca 84




>44952_miR156:micropc
          Length = 84

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 32 tgacagaagagagagagcacaacccg 57
          ||||||||||||||||||||||||||
Sbjct: 1  tgacagaagagagagagcacaacccg 26



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 83  tttgttgggagtgtgctttctcttcttctgtca 115
           ||||||||||||||||| |||  ||||||||||
Sbjct: 52  tttgttgggagtgtgctctctactcttctgtca 84




>46790_miR156:micropc
          Length = 82

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 33 gacagaagagagagagcacaacccg 57
          |||||||||||||||||||||||||
Sbjct: 1  gacagaagagagagagcacaacccg 25



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 83  tttgttgggagtgtgctttctcttcttctgtc 114
           ||||||||||||||||| |||  |||||||||
Sbjct: 51  tttgttgggagtgtgctctctactcttctgtc 82




>45156_miR156:micropc
          Length = 78

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 35 cagaagagagagagcacaacccg 57
          |||||||||||||||||||||||
Sbjct: 1  cagaagagagagagcacaacccg 23




>45310_miR157:micropc
          Length = 85

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 72/86 (83%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                       
Query: 31  ttgacagaagagagagagcacaacccggcatcagctaa-agaaagtctttgcttttgttg 89
           ||||||||||| ||||||||||| |||| || ||| || | ||||| |||||  |||| |
Sbjct: 1   ttgacagaagaaagagagcacaagccgggattagcaaatataaagt-tttgcccttgtcg 59

                                     
Query: 90  ggagtgtgctttctcttcttctgtca 115
           |||||||||| ||| | |||||||||
Sbjct: 60  ggagtgtgctctctttacttctgtca 85




>45619_miR156:micropc
          Length = 84

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 71/85 (83%), Gaps = 2/85 (2%)
 Strand = Plus / Plus

                                                                       
Query: 32  tgacagaagagagagagcacaacccggcatcagctaa-agaaagtctttgcttttgttgg 90
           |||||||||| ||||||||||| |||| || ||| || | ||||| |||||  |||| ||
Sbjct: 1   tgacagaagaaagagagcacaagccgggattagcaaatataaagt-tttgcccttgtcgg 59

                                    
Query: 91  gagtgtgctttctcttcttctgtca 115
           ||||||||| ||| | |||||||||
Sbjct: 60  gagtgtgctctctttacttctgtca 84