miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26021_gga-mir-365-1:mirbase
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 2 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
Query: 62 cctaaaaatccttattgctcttgca 86
|||||||||||||||||||||||||
Sbjct: 61 cctaaaaatccttattgctcttgca 85
>26814_cfa-mir-365-1:mirbase
Length = 87
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgc 61
Query: 61 ccctaaaaatccttattgctcttgca 86
||||||||||||||||||||||||||
Sbjct: 62 ccctaaaaatccttattgctcttgca 87
>27147_eca-mir-365-2:mirbase
Length = 87
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgc 61
Query: 61 ccctaaaaatccttattgctcttgca 86
||||||||||||||||||||||||||
Sbjct: 62 ccctaaaaatccttattgctcttgca 87
>27864_mml-mir-365-1:mirbase
Length = 87
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgc 61
Query: 61 ccctaaaaatccttattgctcttgca 86
||||||||||||||||||||||||||
Sbjct: 62 ccctaaaaatccttattgctcttgca 87
>28601_hsa-mir-365-1:mirbase
Length = 87
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgc 61
Query: 61 ccctaaaaatccttattgctcttgca 86
||||||||||||||||||||||||||
Sbjct: 62 ccctaaaaatccttattgctcttgca 87
>30342_ptr-mir-365-1:mirbase
Length = 86
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgc 60
Query: 61 ccctaaaaatccttattgctcttgca 86
||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgctcttgca 86
>30968_ppy-mir-365-1:mirbase
Length = 87
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgc 61
Query: 61 ccctaaaaatccttattgctcttgca 86
||||||||||||||||||||||||||
Sbjct: 62 ccctaaaaatccttattgctcttgca 87
>31549_oan-mir-365:mirbase
Length = 83
Score = 157 bits (79), Expect = 2e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 3 gcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgccc 62
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 gcagggaaaatgagggacttttgggggcagatgtgtttccattgcactatcataatgccc 60
Query: 63 ctaaaaatccttattgctcttgc 85
|||||||||||||||||||||||
Sbjct: 61 ctaaaaatccttattgctcttgc 83
>32036_mmu-mir-365-1:mirbase
Length = 87
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattccgctatcataatgc 61
Query: 61 ccctaaaaatccttattgctcttgca 86
||||||||||||||||||||||||||
Sbjct: 62 ccctaaaaatccttattgctcttgca 87
>33338_bta-mir-365:mirbase
Length = 87
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgc 61
Query: 61 ccctaaaaatccttattgctcttgca 86
||||||||||||||||||||||||||
Sbjct: 62 ccctaaaaatccttattgctcttgca 87
>33339_bta-mir-365:mirbase
Length = 87
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 2 ccgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgc 61
Query: 61 ccctaaaaatccttattgctcttgca 86
||||||||||||||||||||||||||
Sbjct: 62 ccctaaaaatccttattgctcttgca 87
>34072_ssc-mir-365-1:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 2 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 61
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcc 60
Query: 62 cctaaaaatccttattgctc 81
||||||||||||||||||||
Sbjct: 61 cctaaaaatccttattgctc 80
>26526_tgu-mir-365-1:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 15 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
Query: 75 attgctcttgca 86
||||||||||||
Sbjct: 61 attgctcttgca 72
>25851_xtr-mir-365-1:mirbase
Length = 86
Score = 139 bits (70), Expect = 4e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttcacttacactaccataatgc 60
Query: 61 ccctaaaaatccttattgctcttgca 86
|||||||||||||||||| |||||||
Sbjct: 61 ccctaaaaatccttattgttcttgca 86
>34394_dre-mir-365-1:mirbase
Length = 89
Score = 107 bits (54), Expect = 1e-24
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 1 ccgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgc 60
||||||||| |||||||| |||||||||||| |||||||| || ||| ||||||||||
Sbjct: 1 ccgcagggagaatgaggggcttttgggggcacttgtgtttcagtttcaccatcataatgc 60
Query: 61 ccctaaaaatccttattgctcttgca 86
||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgctcttgca 86
>34395_dre-mir-365-2:mirbase
Length = 98
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
|||||||||||||||| ||||||| ||||||| | || | |||||||||||||||||
Sbjct: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
Query: 69 atccttattgctcttgca 86
||||||||||||||||||
Sbjct: 72 atccttattgctcttgca 89
>32037_mmu-mir-365-2:mirbase
Length = 112
Score = 77.8 bits (39), Expect = 1e-15
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||||| | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
Query: 69 atccttattgctcttgcag 87
|||||||||| ||||||||
Sbjct: 82 atccttattgttcttgcag 100
>32883_rno-mir-365:mirbase
Length = 86
Score = 75.8 bits (38), Expect = 5e-15
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||||| | || | |||||||||||||||||
Sbjct: 10 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 68
Query: 69 atccttattgctcttgca 86
|||||||||| |||||||
Sbjct: 69 atccttattgttcttgca 86
>34650_fru-mir-365:mirbase
Length = 95
Score = 75.8 bits (38), Expect = 5e-15
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 13 tgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcc 72
|||||||||||| ||||||| ||||||| | || | |||||||||||||||||||||
Sbjct: 13 tgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaaatcc 72
Query: 73 ttattgctcttgca 86
||||||||||||||
Sbjct: 73 ttattgctcttgca 86
>34798_tni-mir-365:mirbase
Length = 92
Score = 75.8 bits (38), Expect = 5e-15
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 13 tgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcc 72
|||||||||||| ||||||| ||||||| | || | |||||||||||||||||||||
Sbjct: 13 tgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaaatcc 72
Query: 73 ttattgctcttgca 86
||||||||||||||
Sbjct: 73 ttattgctcttgca 86
>34396_dre-mir-365-3:mirbase
Length = 99
Score = 71.9 bits (36), Expect = 7e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 52 tcataatgcccctaaaaatccttattgctcttgcag 87
||||||||||||||||||||||||||||||||||||
Sbjct: 56 tcataatgcccctaaaaatccttattgctcttgcag 91
>34397_dre-mir-365-4:mirbase
Length = 99
Score = 71.9 bits (36), Expect = 7e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 52 tcataatgcccctaaaaatccttattgctcttgcag 87
||||||||||||||||||||||||||||||||||||
Sbjct: 56 tcataatgcccctaaaaatccttattgctcttgcag 91
>26815_cfa-mir-365-2:mirbase
Length = 111
Score = 69.9 bits (35), Expect = 3e-13
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 81
Query: 69 atccttattgctcttgcag 87
|||||||||| ||||||||
Sbjct: 82 atccttattgttcttgcag 100
>27865_mml-mir-365-2:mirbase
Length = 111
Score = 69.9 bits (35), Expect = 3e-13
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 81
Query: 69 atccttattgctcttgcag 87
|||||||||| ||||||||
Sbjct: 82 atccttattgttcttgcag 100
>28602_hsa-mir-365-2:mirbase
Length = 111
Score = 69.9 bits (35), Expect = 3e-13
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 81
Query: 69 atccttattgctcttgcag 87
|||||||||| ||||||||
Sbjct: 82 atccttattgttcttgcag 100
>30969_ppy-mir-365-2:mirbase
Length = 111
Score = 69.9 bits (35), Expect = 3e-13
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 81
Query: 69 atccttattgctcttgcag 87
|||||||||| ||||||||
Sbjct: 82 atccttattgttcttgcag 100
>33340_bta-mir-365-2:mirbase
Length = 111
Score = 69.9 bits (35), Expect = 3e-13
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 81
Query: 69 atccttattgctcttgcag 87
|||||||||| ||||||||
Sbjct: 82 atccttattgttcttgcag 100
>34073_ssc-mir-365-2:mirbase
Length = 80
Score = 69.9 bits (35), Expect = 3e-13
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 2 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 60
Query: 69 atccttattgctcttgcag 87
|||||||||| ||||||||
Sbjct: 61 atccttattgttcttgcag 79
>34074_ssc-mir-365-2:mirbase
Length = 80
Score = 69.9 bits (35), Expect = 3e-13
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 2 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 60
Query: 69 atccttattgctcttgcag 87
|||||||||| ||||||||
Sbjct: 61 atccttattgttcttgcag 79
>26022_gga-mir-365-2:mirbase
Length = 96
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||| | || | |||||||||||||||||
Sbjct: 11 aaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcccctaaaa 70
Query: 69 atccttattgctcttgca 86
|||||||||| |||||||
Sbjct: 71 atccttattgttcttgca 88
>26527_tgu-mir-365-2:mirbase
Length = 112
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
||||||||||||||| ||||||| ||||||| | || | |||||||||||||||||
Sbjct: 35 aaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcccctaaaa 94
Query: 69 atccttattgctcttgca 86
|||||||||| |||||||
Sbjct: 95 atccttattgttcttgca 112
>30343_ptr-mir-365-2:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 55 taatgcccctaaaaatccttattgctcttgcag 87
|||||||||||||||||||||||| ||||||||
Sbjct: 68 taatgcccctaaaaatccttattgttcttgcag 100
>27146_eca-mir-365:mirbase
Length = 66
Score = 54.0 bits (27), Expect = 2e-08
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 11 aatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaat 70
||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||||
Sbjct: 1 aatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaaat 59
Query: 71 ccttatt 77
|||||||
Sbjct: 60 ccttatt 66
