miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum
sativum PE=1 SV=1
Length = 328
Score = 94.7 bits (234), Expect = 2e-19
Identities = 47/62 (75%), Positives = 52/62 (83%)
Frame = +2
Query: 2 ASLNXXXXXXXXTFPSLIQDKPVFASSSPFITPILREEMGKGYEEAIQELEKLLREKADL 181
ASLN TFPSLIQDKPVFASSSP ITP+LREEMGKGY+EAI+EL+KLLREK +L
Sbjct: 32 ASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPVLREEMGKGYDEAIEELQKLLREKTEL 91
Query: 182 KA 187
KA
Sbjct: 92 KA 93
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana
tabacum PE=2 SV=1
Length = 321
Score = 58.5 bits (140), Expect = 1e-08
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = +2
Query: 44 PSLIQDKPVFASSSPFITPILREEMGK-GYEEAIQELEKLLREKADL 181
PSLI+++PVFA+ +P I PILREEM K YE+AI LEKLL EK +L
Sbjct: 41 PSLIRNEPVFAAPTPIINPILREEMAKESYEQAIAALEKLLSEKGEL 87
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia
oleracea PE=1 SV=2
Length = 319
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +2
Query: 44 PSLIQDKPVFASSSPFITPILREEMGKGYEEAIQELEKLLREKADLK 184
PSLI+++PVFA+ +P ITP L+E+M YEEAI L+KLL EK +L+
Sbjct: 42 PSLIRNQPVFAAPAPIITPTLKEDM--AYEEAIAALKKLLSEKGELE 86
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic
OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2
Length = 347
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/48 (54%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +2
Query: 44 PSLIQDKPVFASSSPFITPILREEMG-KGYEEAIQELEKLLREKADLK 184
P+LI+++PVFA+ +P I P EEMG + Y+EAI+ L+KLL EK +LK
Sbjct: 54 PTLIRNEPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELK 101
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2
SV=1
Length = 329
Score = 51.2 bits (121), Expect = 2e-06
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 38 TFPSLIQDKPVFASSSPFITPILREEMGKGYEEAIQELEKLLREKADLK 184
T PSLI+++PVFA+ +P ITP E+ + YEEAI L+K+L EK +L+
Sbjct: 48 TPPSLIRNEPVFAAPAPIITPNWTEDGNESYEEAIDALKKMLIEKGELE 96
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2
SV=1
Length = 330
Score = 51.2 bits (121), Expect = 2e-06
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 38 TFPSLIQDKPVFASSSPFITPILREEMGKGYEEAIQELEKLLREKADLK 184
T PSLI+++PVFA+ +P ITP E+ + YEEAI L+K+L EK +L+
Sbjct: 49 TPPSLIRNEPVFAAPAPIITPNWTEDGNESYEEAIDALKKMLIEKGELE 97
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2
SV=1
Length = 330
Score = 51.2 bits (121), Expect = 2e-06
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 38 TFPSLIQDKPVFASSSPFITPILREEMGKGYEEAIQELEKLLREKADLK 184
T PSLI+++PVFA+ +P ITP E+ + YEEAI L+K+L EK +L+
Sbjct: 49 TPPSLIRNEPVFAAPAPIITPNWTEDGNESYEEAIDALKKMLIEKGELE 97
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2
SV=2
Length = 330
Score = 50.1 bits (118), Expect = 4e-06
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +2
Query: 38 TFPSLIQDKPVFASSSPFITPILREEMGKGYEEAIQELEKLLREKADLK 184
T PSLI+++PVFA+ +P ITP E+ + YEEAI L+K L EK +L+
Sbjct: 49 TPPSLIRNEPVFAAPAPIITPNWTEDGNESYEEAIDALKKTLIEKGELE 97
