miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01018440.1/8398-8301 39947:Oryza sativa
          Japonica Group
          Length = 98

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 14 ttactccctccgtcccaaaatg 35
          ||||||||||||||||||||||
Sbjct: 95 ttactccctccgtcccaaaatg 74

>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
          Length = 117

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 13  tttactccctccgtcccaaaat 34
           ||||||||||||||||||||||
Sbjct: 115 tttactccctccgtcccaaaat 94

>RF00906;MIR1122;AL606632.5/91694-91591 4530:Oryza sativa (rice)
          Length = 104

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 12  ttttactccctccgtcccaaaa 33
           ||||||||||||||||||||||
Sbjct: 103 ttttactccctccgtcccaaaa 82