miRNEST 2.0, an integrative microRNA resource :: BLAST
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>32681_rno-mir-27b:mirbase
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
Query: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 2 cctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttgt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttgt 60
Query: 62 tcacagtggctaagttctgcacctgaagagaaggtg 97
||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcacagtggctaagttctgcacctgaagagaaggtg 96
>33156_bta-mir-27b:mirbase
Length = 97
Score = 168 bits (85), Expect = 5e-43
Identities = 94/97 (96%)
Strand = Plus / Plus
Query: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
|||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 acctctctgacgaggtgcagagcttagctgattggtgaacagtgactggtttccgctttg 60
Query: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>25910_gga-mir-27b:mirbase
Length = 97
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 13 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 72
|||||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattgtttccctctttgttcacagtggct 72
Query: 73 aagttctgcacctgaagagaaggtg 97
|||||||||||||||||||||||||
Sbjct: 73 aagttctgcacctgaagagaaggtg 97
>31798_mmu-mir-27b:mirbase
Length = 73
Score = 145 bits (73), Expect = 7e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 13 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
Query: 73 aagttctgcacct 85
|||||||||||||
Sbjct: 61 aagttctgcacct 73
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 145 bits (73), Expect = 7e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 13 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 72
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 63
Query: 73 aagttctgcacctgaag 89
|||||||||||||||||
Sbjct: 64 aagttctgcacctgaag 80
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 143 bits (72), Expect = 3e-35
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
|||| |||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 1 acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 60
Query: 61 ttcacagtggctaagttctgcacctgaagaga 92
||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagaga 92
>26416_tgu-mir-27:mirbase
Length = 91
Score = 141 bits (71), Expect = 1e-34
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 13 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 72
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattgttttcctctttgttcacagtggct 72
Query: 73 aagttctgcacctgaagag 91
|||||||||||||||||||
Sbjct: 73 aagttctgcacctgaagag 91
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 141 bits (71), Expect = 1e-34
Identities = 89/95 (93%)
Strand = Plus / Plus
Query: 1 acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60
|||||||| ||||||||||||||||||| |||||||||||||| | || ||||| |||||
Sbjct: 1 acctctctgacaaggtgcagagcttagccgattggtgaacagtcactgatttcctctttg 60
Query: 61 ttcacagtggctaagttctgcacctgaagagaagg 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaagg 95
>26967_eca-mir-27b:mirbase
Length = 73
Score = 137 bits (69), Expect = 2e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 13 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 72
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 60
Query: 73 aagttctgcacct 85
|||||||||||||
Sbjct: 61 aagttctgcacct 73
>34566_fru-mir-27b:mirbase
Length = 74
Score = 121 bits (61), Expect = 1e-28
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 18 cagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagtt 77
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 6 cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65
Query: 78 ctgcacctg 86
|||||||||
Sbjct: 66 ctgcacctg 74
>34713_tni-mir-27b:mirbase
Length = 74
Score = 121 bits (61), Expect = 1e-28
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 18 cagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagtt 77
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 6 cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65
Query: 78 ctgcacctg 86
|||||||||
Sbjct: 66 ctgcacctg 74
>26646_cfa-mir-27b:mirbase
Length = 63
Score = 117 bits (59), Expect = 2e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 19 agagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagttc 78
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
Query: 79 tgc 81
|||
Sbjct: 61 tgc 63
>31445_oan-mir-27b:mirbase
Length = 117
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 17 gcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagt 76
|||||||||||||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct: 28 gcagagcttagctgattggtgaacagtgattgctggactctttgttcacagtggctaagt 87
Query: 77 tctgcacctgaagagaagg 95
||||| || | ||||||||
Sbjct: 88 tctgcgcccgcagagaagg 106
>34238_dre-mir-27b:mirbase
Length = 91
Score = 91.7 bits (46), Expect = 9e-20
Identities = 72/80 (90%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 13 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 72
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 12 aggtgcagagcttagctgattggtgaacagtgattg---aactctttgttcacagtggct 68
Query: 73 aagttctgcacctgaagaga 92
|||||||||| |||| ||||
Sbjct: 69 aagttctgcatctgaggaga 88
>34240_dre-mir-27d:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 57 tttgttcacagtggctaagttctgcacctgaagagaa 93
||||||||||||||||||||||| |||| ||| ||||
Sbjct: 53 tttgttcacagtggctaagttcttcacccgaaaagaa 89
>25450_pma-mir-27b:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttctgca 82
||||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgca 70
>25449_pma-mir-27a:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 ttgttcacagtggctaagttc 78
|||||||||||||||||||||
Sbjct: 47 ttgttcacagtggctaagttc 67
>34568_fru-mir-27e:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 ttgttcacagtggctaagttc 78
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>34715_tni-mir-27e:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 ttgttcacagtggctaagttc 78
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>26645_cfa-mir-27a:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 39 tgttcacagtggctaagttc 58
>26966_eca-mir-27a:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>27491_age-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27599_sla-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27673_mml-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28187_mne-mir-27a:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30774_ppy-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31404_lca-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31444_oan-mir-27a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 51 tgttcacagtggctaagttc 70
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>32680_rno-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>33154_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33155_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>34237_dre-mir-27a:mirbase
Length = 131
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttc 96
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tgttcacagtggctaagttc 78
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
