miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 69.9 bits (35), Expect = 3e-13
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 7 tccgtcccataatataaaagtgtttttcacactacactagtgacaaaaacgctcttatat 66
|||||| || ||||||| || |||||| ||||||||||||| ||||| ||||||||||
Sbjct: 8 tccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgctcttatat 67
Query: 67 tatgggacggaggga 81
| |||||||||||||
Sbjct: 68 tttgggacggaggga 82
Score = 61.9 bits (31), Expect = 6e-11
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgtttttcacactacactagtgacaaaaacgctcttatat 66
||||||||| ||||||| || ||||| |||||| ||||| |||||||||||||||||
Sbjct: 78 tccgtcccaaaatataagagcattttttacactagtgtagtgccaaaaacgctcttatat 19
Query: 67 tatgggacggaggga 81
| || ||||||||||
Sbjct: 18 tttgagacggaggga 4
>46560_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>46416_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>46351_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>46296_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>46229_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>46082_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>45853_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>45812_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>45616_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>45608_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>45459_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>45450_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>45382_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>45149_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>44955_miR1436:micropc
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
|||||||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggaggga 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
||||||||||||||||| || ||||||
Sbjct: 74 tccgtcccataatataagagcgttttt 48
>46744_miR1436:micropc
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 49 acaaaaacgctcttatattatgggacggaggga 81
||||||| |||||||||||||||||||||||||
Sbjct: 49 acaaaaatgctcttatattatgggacggaggga 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
||||||| ||||||||||||| |||||||||
Sbjct: 33 aaaaacgttcttatattatggaacggaggga 3
>46683_miR1436:micropc
Length = 60
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 cttatattatgggacggaggga 81
||||||||||||||||||||||
Sbjct: 37 cttatattatgggacggaggga 58
>46658_miR1436:micropc
Length = 79
Score = 42.1 bits (21), Expect = 6e-05
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 29 tttttcacactacactagtgacaaaaacgctcttatattatgggacggaggga 81
||||| |||||||| ||| | |||||| ||||| |||||||||||||||||
Sbjct: 27 tttttgacactacaatagagtcaaaaaacgtcttacattatgggacggaggga 79
>46187_miR1132:micropc
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 63/76 (82%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 7 tccgtcccataatataaaagtgtttttcacac-tacactagtgacaaaaacgctcttata 65
||||||||||||| ||| | |||||||||| |||||||||| |||| | ||||| |
Sbjct: 6 tccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacgtcttaca 65
Query: 66 ttatgggacggaggga 81
|||||| |||||||||
Sbjct: 66 ttatggaacggaggga 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 59 tcttatattatgggacggaggga 81
||||| |||||||||||||||||
Sbjct: 24 tcttacattatgggacggaggga 2
>46261_miR1120:micropc
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggag 78
||||||||||||||||||||
Sbjct: 57 tcttatattatgggacggag 76
>46428_miR1436:micropc
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggaggga 81
||||| |||||||||||||||||
Sbjct: 45 tcttacattatgggacggaggga 67
>46264_miR1436:micropc
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggaggga 81
||||| |||||||||||||||||
Sbjct: 45 tcttacattatgggacggaggga 67
>46194_miR1436:micropc
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 tccgtcccataatataaaagtgttttt 33
|||||| ||||||||||||| ||||||
Sbjct: 77 tccgtctcataatataaaagcgttttt 51
>46077_miR1130:micropc
Length = 75
Score = 38.2 bits (19), Expect = 0.001
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 29 tttttcacactacactagtgacaaaaacgctcttatattatgggacggagg 79
||||| |||||||| ||| | |||||| ||||| |||||||||||||||
Sbjct: 25 tttttgacactacaatagagtcaaaaaacgtcttacattatgggacggagg 75
>45676_miR1436:micropc
Length = 85
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 51 aaaaacgctcttatattatgggacggaggga 81
||||||| ||||||||||||| ||||||||
Sbjct: 53 aaaaacgtacttatattatggggcggaggga 83
>45393_miR1436:micropc
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggaggga 81
||||| |||||||||||||||||
Sbjct: 45 tcttacattatgggacggaggga 67
>45005_miR1436:micropc
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggaggga 81
||||| |||||||||||||||||
Sbjct: 45 tcttacattatgggacggaggga 67
>44928_miR1436:micropc
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggaggga 81
||||| |||||||||||||||||
Sbjct: 45 tcttacattatgggacggaggga 67
