miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>28527_hsa-mir-208b:mirbase
          Length = 77

 Score =  153 bits (77), Expect = 2e-38
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60

                           
Query: 61 ggtttgtctgagggcag 77
          |||||||||||||||||
Sbjct: 61 ggtttgtctgagggcag 77




>30904_ppy-mir-208b:mirbase
          Length = 77

 Score =  153 bits (77), Expect = 2e-38
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60

                           
Query: 61 ggtttgtctgagggcag 77
          |||||||||||||||||
Sbjct: 61 ggtttgtctgagggcag 77




>30286_ptr-mir-208b:mirbase
          Length = 76

 Score =  151 bits (76), Expect = 8e-38
 Identities = 76/76 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60

                          
Query: 61 ggtttgtctgagggca 76
          ||||||||||||||||
Sbjct: 61 ggtttgtctgagggca 76




>27094_eca-mir-208b:mirbase
          Length = 77

 Score =  129 bits (65), Expect = 3e-31
 Identities = 74/77 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
          ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||
Sbjct: 1  cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60

                           
Query: 61 ggtttgtctgagggcag 77
          |||||||||||||||||
Sbjct: 61 ggtttgtctgagggcag 77




>33286_bta-mir-208b:mirbase
          Length = 77

 Score =  129 bits (65), Expect = 3e-31
 Identities = 74/77 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
          ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||
Sbjct: 1  cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60

                           
Query: 61 ggtttgtctgagggcag 77
          |||||||||||||||||
Sbjct: 61 ggtttgtctgagggcag 77




>34037_ssc-mir-208b:mirbase
          Length = 80

 Score =  127 bits (64), Expect = 1e-30
 Identities = 73/76 (96%)
 Strand = Plus / Plus

                                                                      
Query: 2  ctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaag 61
          |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||
Sbjct: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60

                          
Query: 62 gtttgtctgagggcag 77
          ||||||||||||||||
Sbjct: 61 gtttgtctgagggcag 76




>31936_mmu-mir-208b:mirbase
          Length = 77

 Score =  125 bits (63), Expect = 5e-30
 Identities = 72/75 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
          ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||
Sbjct: 1  cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60

                         
Query: 61 ggtttgtctgagggc 75
          |||||||||||||||
Sbjct: 61 ggtttgtctgagggc 75




>32799_rno-mir-208b:mirbase
          Length = 112

 Score =  125 bits (63), Expect = 5e-30
 Identities = 72/75 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
          ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||
Sbjct: 17 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 76

                         
Query: 61 ggtttgtctgagggc 75
          |||||||||||||||
Sbjct: 77 ggtttgtctgagggc 91




>32800_rno-mir-208b:mirbase
          Length = 112

 Score =  125 bits (63), Expect = 5e-30
 Identities = 72/75 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
          ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||
Sbjct: 17 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 76

                         
Query: 61 ggtttgtctgagggc 75
          |||||||||||||||
Sbjct: 77 ggtttgtctgagggc 91




>26769_cfa-mir-208b:mirbase
          Length = 74

 Score =  123 bits (62), Expect = 2e-29
 Identities = 71/74 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
          ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||
Sbjct: 1  cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60

                        
Query: 61 ggtttgtctgaggg 74
          ||||||||||||||
Sbjct: 61 ggtttgtctgaggg 74