miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 194 bits (98), Expect = 4e-49
Identities = 146/162 (90%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgga 101
||||||||| ||||||||||||||| ||||||||| |||| ||||||||||| |||||||
Sbjct: 5 tactccctctgttcctaaatataagtctttttagagattctaatatggactacatacgga 64
Query: 102 gcaaaatgagtgaatctacactccaaaatatgtctatatacatccgcatgtagtccgtat 161
||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||| |||
Sbjct: 65 gcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtccatat 124
Query: 162 tcaaatctttaaaagggcttatatttagaaatggaggaagta 203
|||||||| ||||| | ||||||||||| || ||||| ||||
Sbjct: 125 tcaaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 81.8 bits (41), Expect = 4e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgg 100
|||||||||||||||||||||||||| ||||||||| ||| ||||||||||| ||||||
Sbjct: 167 atactccctccgttcctaaatataagtctttttagagatttgaatatggactacatacgg 108
Query: 101 a 101
|
Sbjct: 107 a 107
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 129 bits (65), Expect = 2e-29
Identities = 141/165 (85%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataagcctttttagatattccaatatg-gactatatac 98
||||||||||||||||| ||||||||| | |||||| |||| || || | ||||| ||||
Sbjct: 165 tatactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatac 106
Query: 99 ggagcaaaatgagtgaatctacactccaaaatatgtctatatacatccgcatgtagtccg 158
||||||||||||||||||||| |||| ||||||||||||| |||||||| |||||||
Sbjct: 105 ggagcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagttta 46
Query: 159 tattcaaatctttaaaagggcttatatttagaaatggaggaagta 203
|| | ||||| ||||||| ||||||||||| || ||||| ||||
Sbjct: 45 tagtacaatctctaaaaggtcttatatttaggaacggagggagta 1
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttaga 76
||||||||||||||||||||||||| | |||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttaga 35
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 125 bits (63), Expect = 3e-28
Identities = 138/163 (84%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgga 101
||||||||||||||||||||||||| | ||||| | ||| || ||| ||||| |||||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcactatagactacatacgga 104
Query: 102 gcaaaatgagtgaatctacactccaaaatatgtctatatacatccgcatgtagtccgtat 161
||||||||||||||| |||| |||||||||| ||| ||||||||| ||||||| ||
Sbjct: 103 gcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagtttatag 44
Query: 162 tcaaatctttaaaagggcttatatttagaaatggaggaagtag 204
| | |||| ||||||| ||||||||||| || ||||| |||||
Sbjct: 43 tgagatctctaaaaggtcttatatttaggaacggagggagtag 1
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttaga 76
||||||||||||||||||||||||| | |||||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttaga 36
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 119 bits (60), Expect = 2e-26
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 39 ttatactccctccgttcctaaatataagcctttttagatattccaatatggactatatac 98
|||||||||||||||||||||||||||| ||||||||| ||| || ||||||||| ||||
Sbjct: 2 ttatactccctccgttcctaaatataagtctttttagagattacactatggactacatac 61
Query: 99 ggagcaaaatgagtgaatct 118
||||||||||||||||||||
Sbjct: 62 ggagcaaaatgagtgaatct 81
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 46 ccctccgttcctaaatataagcctttttagatattc 81
||||||||||||||||||||| | ||||||| ||||
Sbjct: 111 ccctccgttcctaaatataagtccttttagagattc 76
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 119 bits (60), Expect = 2e-26
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatg-gactatatacgg 100
||||||||||||||||||||||||| ||||||||| ||| | || ||||| ||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 101 agcaaaatgagtgaatctacactccaaaatatgtctatatacatccgcatgtagtc 156
||||||||||||||||||| | || |||||||||||||||||||||| ||||||||
Sbjct: 104 agcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtc 49
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttaga 76
||||||||||||||||||||||||| |||||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttttaga 35
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 113 bits (57), Expect = 1e-24
Identities = 139/165 (84%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatg-gactatatacgg 100
||||||||||||||| ||||||||| | |||||| |||| || || ||||| ||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 101 agcaaaatgagtgaatctacactccaaaatatgtctatatacatccgcatgtagtccgta 160
||||||||||| ||||||| |||| ||||||||||||| |||||||| ||||||| ||
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagtttata 47
Query: 161 ttcaaatctttaaaagggcttatatttagaaatggaggaagtagt 205
| ||||| ||||||| ||||||||||| || ||||| ||||||
Sbjct: 46 gtacaatctctaaaaggtcttatatttaggaacggagggagtagt 2
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttaga 76
||||||||||||||||||||||||| | |||||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttaga 38
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 105 bits (53), Expect = 3e-22
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgga 101
||||||||||||||||||||||||| || | |||| ||| || ||||||||| ||||| |
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcactatggactacatacgaa 102
Query: 102 gcaaaatgagtgaatctacactccaaaat 130
||||||||||||||||||||||| |||||
Sbjct: 101 gcaaaatgagtgaatctacactctaaaat 73
Score = 67.9 bits (34), Expect = 6e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatggac 91
||||||||||||||||||||||||| |||| |||| |||||| |||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagattccactatggac 54
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 101 bits (51), Expect = 4e-21
Identities = 135/163 (82%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgg 100
|||||||||||||||||||||||||| |||| | | ||| || ||||||| | ||||||
Sbjct: 1 atactccctccgttcctaaatataagtctttggacagatttcattatggaccacatacgg 60
Query: 101 agcaaaatgagtgaatctacactccaaaatatgtctatatacatccgcatgtagtccgta 160
|| |||||||||||| ||| |||| ||||| |||| ||||||||| |||| |||| ||
Sbjct: 61 agtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtccata 120
Query: 161 ttcaaatctttaaaagggcttatatttagaaatggaggaagta 203
| |||||| || || | ||||||||||| |||||||| ||||
Sbjct: 121 gtgaaatctctacaaagacttatatttaggaatggagggagta 163
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgga 101
|||||||||| |||||||||||||| |||| |||| ||| || ||||||| | |||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcactatggaccacatacgga 104
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 99.6 bits (50), Expect = 2e-20
Identities = 98/114 (85%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgga 101
||||||||||||||||||||||||| | ||||||| |||| | ||||||||| |||||||
Sbjct: 5 tactccctccgttcctaaatataagaccttttagaaattctactatggactacatacgga 64
Query: 102 gcaaaatgagtgaatctacactccaaaatatgtctatatacatccgcatgtagt 155
||||| | | || ||| || | |||||||||||||||||||||| |||||||
Sbjct: 65 acaaaacaaataaacctataccctaaaatatgtctatatacatccgtatgtagt 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgg 100
|||||||||||||||||||||||||| | |||||| |||| || |||| |||| ||||||
Sbjct: 167 atactccctccgttcctaaatataagaccttttaggtattacactatgaactacatacgg 108
Query: 101 a 101
|
Sbjct: 107 a 107
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 97.6 bits (49), Expect = 7e-20
Identities = 101/117 (86%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatg-gactatatacgg 100
||||||||||||||||||||||||| ||||| || ||| || || | ||| ||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 101 agcaaaatgagtgaatctacactccaaaatatgtctatatacatccgcatgtagtcc 157
|||||||||| ||||| ||||||| ||| |||||||||||||||||| |||||||||
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtcc 117
Score = 58.0 bits (29), Expect = 6e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaat-atggactatatacgg 100
||||||||||||||||||||||||| |||| |||| ||| || | |||||||| ||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacgg 105
Query: 101 a 101
|
Sbjct: 104 a 104
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 83.8 bits (42), Expect = 1e-15
Identities = 101/118 (85%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatataagcctttttagatattccaatatgga-ctatatacg 99
||||||||||||||||||||| |||| ||||||||| ||| | || || ||| ||| |
Sbjct: 2 atactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatg 61
Query: 100 gagcaaaatgagtgaatctacactccaaaatatgtctatatacatccgcatgtagtcc 157
||||||||||||||||||| |||| || |||||||||||||||||| |||||||||
Sbjct: 62 gagcaaaatgagtgaatctgtactctaag-tatgtctatatacatccgtatgtagtcc 118
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttaga 76
||||||||||||||||||||||||| |||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttaga 131
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 81.8 bits (41), Expect = 4e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgga 101
||||||||||||||||||||||||| |||| ||| ||| || ||| ||| | |||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttggagagatttcactatagaccacatacgga 64
Query: 102 gcaaaatgagtgaatctacac 122
| |||||||||||||||||||
Sbjct: 65 gaaaaatgagtgaatctacac 85
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgga 101
||||||||||||||||||||||||| ||| |||||||| || | ||||| | |||||||
Sbjct: 165 tactccctccgttcctaaatataagtcttcgtagatatttcactgtggaccacatacgga 106
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataagcctttttagatattccaata-tggactatatac 98
||||||||||||||||||||||||||| ||||| ||||||| || || | | ||| ||||
Sbjct: 153 tatactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatac 94
Query: 99 ggagcaaaatgagt 112
||||||||||||||
Sbjct: 93 ggagcaaaatgagt 80
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 40 tatactccctccgttcctaaatataagccttt 71
||||||||||||||||||||||||||| ||||
Sbjct: 3 tatactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataagccttt 71
||||||||||||||||||||||||||| ||||
Sbjct: 140 tatactccctccgttcctaaatataagtcttt 109
Score = 52.0 bits (26), Expect = 4e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 40 tatactccctccgttcctaaatataagcctttttagatattccaatatg-gactatatac 98
|||||||||||||| | |||||||||| ||||| ||||||| || || | | ||| ||||
Sbjct: 3 tatactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatac 62
Query: 99 ggagcaaaat 108
||||||||||
Sbjct: 63 ggagcaaaat 72
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 tatactccctccgttcctaaatataagc 67
||||||||||||||||||||||||||||
Sbjct: 3 tatactccctccgttcctaaatataagc 30
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataa 65
||||||||||||||||||||||||||
Sbjct: 117 tatactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP005676.3/140751-140855 39947:Oryza sativa
Japonica Group
Length = 105
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 38 attatactccctccgttcctaaatataagcctttttag 75
|||||||||||||||||| |||||||||| |||||||
Sbjct: 1 attatactccctccgttctaaaatataagcatttttag 38
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataag 66
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatataag 66
|||||||||| |||||||||||||||
Sbjct: 4 atactccctctgttcctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatactccctccgttcctaaatata 64
|||||||||||||||||||||||||
Sbjct: 3 tatactccctccgttcctaaatata 27
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataag 66
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataagc 67
||||||||||||||||| ||||||||||
Sbjct: 120 tatactccctccgttccaaaatataagc 93
>RF00906;MIR1122;CT030168.3/87017-87173 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 40 tatactccctccgttcctaaatataagc 67
||||||||||||||| ||||||||||||
Sbjct: 3 tatactccctccgtttctaaatataagc 30
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataagc 67
|||||||||||||| ||||||||||||
Sbjct: 154 atactccctccgtttctaaatataagc 128
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 48.1 bits (24), Expect = 6e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatataagcctttttagatattccaatatggactatatacgg 100
||||||||||| |||||||||||||| |||| || | ||| || || |||||| |||||
Sbjct: 4 atactccctcctttcctaaatataagtctttctaaagatttcactacggactacatacga 63
Query: 101 agcaaaatgagtgaat 116
|| |||||| |||||
Sbjct: 64 agtgaaatgaatgaat 79
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 149 atgtagtccgtattcaaatctttaaaagggcttatatttagaaatggaggaagta 203
|||||||||||| | ||||||||| || | ||||||||||| || ||||| ||||
Sbjct: 59 atgtagtccgtagtgaaatctttagaaagacttatatttaggaaaggagggagta 5
>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
Japonica Group
Length = 96
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataagcctttttagatatt 80
||||||||||||| || |||||||||| ||||||| ||||
Sbjct: 93 atactccctccgtcccaaaatataagcatttttagctatt 54
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 ttatactccctccgttcctaaatataag 66
||||||||||||||| ||||||||||||
Sbjct: 139 ttatactccctccgtccctaaatataag 112
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 actccctccgttcctaaatataag 66
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatat 63
|||||||||||||||||||||||
Sbjct: 239 atactccctccgttcctaaatat 217
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatat 63
|||||||||||||||||||||||
Sbjct: 1 atactccctccgttcctaaatat 23
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataagc 67
|||||||||||||||| ||||||||||
Sbjct: 154 atactccctccgttccaaaatataagc 128
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataagc 67
|||||||||||||||| ||||||||||
Sbjct: 152 atactccctccgttccaaaatataagc 126
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatata 64
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaata 62
|||||||||||||||||||||||
Sbjct: 92 tatactccctccgttcctaaata 70
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataag 66
|||||||||||||| ||||||||||||
Sbjct: 139 tatactccctccgtccctaaatataag 113
>RF00906;MIR1122;AP008208.1/1166338-1166449 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataagccttttta 74
|||||||||||||| || |||||||||| ||||||
Sbjct: 110 tatactccctccgtcccaaaatataagcattttta 76
>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataag 66
|||||||||||||| ||||||||||||
Sbjct: 154 tatactccctccgtccctaaatataag 128
>RF00906;MIR1122;AP003760.4/5605-5476 39947:Oryza sativa Japonica
Group
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataagccttttta 74
|||||||||||||| || |||||||||| ||||||
Sbjct: 128 tatactccctccgtcccaaaatataagcattttta 94
>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataagcctttttag 75
||||||||||||| || |||||||||| |||||||
Sbjct: 109 atactccctccgtcccaaaatataagcatttttag 75
>RF00906;MIR1122;AP005421.3/127890-127779 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatataagcctttttag 75
||||||||||||| || |||||||||| |||||||
Sbjct: 4 atactccctccgtcccaaaatataagcatttttag 38
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataag 66
||||||| |||||||||||||||||||
Sbjct: 148 tatactcactccgttcctaaatataag 122
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 40 tatactccctccgttcctaaatataag 66
|||||||||||||| ||||||||||||
Sbjct: 119 tatactccctccgtccctaaatataag 93
>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
Japonica Group
Length = 86
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatataagcctttttag 75
||||||||||||| || |||||||||| |||||||
Sbjct: 4 atactccctccgtcccaaaatataagcatttttag 38
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatat 63
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatat 63
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AAAA02009180.1/3960-4197 39946:Oryza sativa Indica
Group
Length = 238
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 182 atatttagaaatggaggaagta 203
||||||||||||||||||||||
Sbjct: 23 atatttagaaatggaggaagta 2
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatat 63
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatat 63
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003957.2/43024-42788 39947:Oryza sativa Japonica
Group
Length = 237
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 atatttagaaatggaggaagta 203
||||||||||||||||||||||
Sbjct: 215 atatttagaaatggaggaagta 236
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatat 63
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatat 63
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AC084817.5/122733-122979 39947:Oryza sativa Japonica
Group
Length = 247
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 atatttagaaatggaggaagta 203
||||||||||||||||||||||
Sbjct: 225 atatttagaaatggaggaagta 246
>RF00906;MIR1122;AK248235.1/1048-956 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 38 attatactccctccgttcctaaatat 63
||||||||||||| ||||||||||||
Sbjct: 1 attatactccctctgttcctaaatat 26
>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatataag 66
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP008209.1/35984076-35984203 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 124 tactccctccgtcccaaaatataagcatttttag 91
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataag 66
||||||||||||| ||||||||||||
Sbjct: 153 atactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02016488.1/7317-7428 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 108 tactccctccgtcccaaaatataagcatttttag 75
>RF00906;MIR1122;AAAA02018853.1/118-229 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 108 tactccctccgtcccaaaatataagcatttttag 75
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
Group
Length = 110
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagc 67
|||||||||||| |||||||||||||
Sbjct: 106 tactccctccgtccctaaatataagc 81
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatataag 66
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC097175.2/115469-115358 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
||||||||||||| | |||||||||| |||||||
Sbjct: 108 tactccctccgtttcaaaatataagcatttttag 75
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataag 66
||||||||||||| ||||||||||||
Sbjct: 128 atactccctccgtccctaaatataag 103
>RF00906;MIR1122;AP002972.3/107404-107293 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttag 38
>RF00906;MIR1122;AP005896.3/119867-120022 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatataag 66
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP008209.1/8919908-8919797 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 108 tactccctccgtcccaaaatataagcatttttag 75
>RF00906;MIR1122;AC130724.2/11285-11174 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttag 38
>RF00906;MIR1122;AP003410.4/123214-123103 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 108 tactccctccgtcccaaaatataagcatttttag 75
>RF00906;MIR1122;AP008207.1/42089526-42089634 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttag 38
>RF00906;MIR1122;AP005586.3/39119-39252 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 130 tactccctccgtcccaaaatataagcatttttag 97
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 108 tactccctccgtcccaaaatataagcttttttag 75
>RF00906;MIR1122;AP005399.3/486-590 39947:Oryza sativa Japonica
Group
Length = 105
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 38 attatactccctccgttcctaaatataagcctttttag 75
|||||||||||||||||| |||||||| | |||||||
Sbjct: 1 attatactccctccgttctaaaatataatcatttttag 38
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 108 tactccctccgtcccaaaatataagcatttttag 75
>RF00906;MIR1122;AC138197.3/31250-31161 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 86 tactccctccgtcccaaaatataagcatttttag 53
>RF00906;MIR1122;AACV01025228.1/13353-13452 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttag 38
>RF00906;MIR1122;AAAA02015448.1/20736-20847 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
||||||||||||||| |||||||| | |||||||
Sbjct: 108 tactccctccgttccaaaatataaacatttttag 75
>RF00906;MIR1122;AAAA02016947.1/4733-4836 39946:Oryza sativa
Indica Group
Length = 104
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttag 38
>RF00906;MIR1122;AAAA02004209.1/3478-3367 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaatataagcatttttag 38
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataag 66
|||||||||||||||| |||||||||
Sbjct: 92 atactccctccgttccaaaatataag 67
>RF00906;MIR1122;AC120987.2/63054-63157 39947:Oryza sativa Japonica
Group
Length = 104
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 100 tactccctccgtcccaaaatataagcatttttag 67
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataag 66
||||||||||||| ||||||||||||
Sbjct: 128 atactccctccgtccctaaatataag 103
>RF00906;MIR1122;AL731597.3/103356-103467 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 42 tactccctccgttcctaaatataagcctttttag 75
|||||||||||| || |||||||||| |||||||
Sbjct: 108 tactccctccgtcccaaaatataagcatttttag 75
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataag 66
||||||||||||| ||||||||||||
Sbjct: 152 atactccctccgtccctaaatataag 127
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 atactccctccgttcctaaatataag 66
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
Length = 163
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 41 atactccctccgttcctaaatataag 66
||||||||||||| ||||||||||||
Sbjct: 160 atactccctccgtccctaaatataag 135
