miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00641;mir-154;AAGU02626699.1/1300-1379 9785:Loxodonta africana
(African savanna elephant)
Length = 80
Score = 135 bits (68), Expect = 8e-32
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 2 tgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaact 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaact 66
Query: 62 tttgtttg 69
||||||||
Sbjct: 67 tttgtttg 74
>RF00641;mir-154;AAIY01409313.1/249-170 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 80
Score = 87.7 bits (44), Expect = 2e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 2 tgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaact 61
||||||| |||||| |||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 7 tgagcaggggttgctcttggtgaattcgctttattcttgttgaatcacacaaaggtaact 66
Query: 62 tttgtttg 69
|| |||||
Sbjct: 67 ttggtttg 74
>RF00641;mir-154;ABRQ01054378.1/68-143 9813:Procavia capensis
(cape rock hyrax)
Length = 76
Score = 61.9 bits (31), Expect = 9e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 35 tttatgttgaatcacacaaaggcaacttttgtttg 69
|||||||||||||||||||||||| ||||||||||
Sbjct: 36 tttatgttgaatcacacaaaggcagcttttgtttg 70
