miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27899_mml-mir-423:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
>32066_mmu-mir-423:mirbase
Length = 109
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 72
Query: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
||||||||||||||||||||||||||||||||||
Sbjct: 73 ctgaggcccctcagtcttgcttcctaccccgcgc 106
>32067_mmu-mir-423:mirbase
Length = 109
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 72
Query: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
||||||||||||||||||||||||||||||||||
Sbjct: 73 ctgaggcccctcagtcttgcttcctaccccgcgc 106
>33367_bta-mir-423:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
>33368_bta-mir-423:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
>30370_ptr-mir-423:mirbase
Length = 93
Score = 184 bits (93), Expect = 8e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 61 ctgaggcccctcagtcttgcttcctaccccgcg 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaccccgcg 93
>28645_hsa-mir-423:mirbase
Length = 94
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
|||||||||||||||||||||||||| |||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaacccgcgc 94
>28646_hsa-mir-423:mirbase
Length = 94
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggt 60
Query: 61 ctgaggcccctcagtcttgcttcctaccccgcgc 94
|||||||||||||||||||||||||| |||||||
Sbjct: 61 ctgaggcccctcagtcttgcttcctaacccgcgc 94
>30999_ppy-mir-423:mirbase
Length = 90
Score = 178 bits (90), Expect = 5e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 5 aggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctga 60
Query: 65 ggcccctcagtcttgcttcctaccccgcgc 94
||||||||||||||||||||||||||||||
Sbjct: 61 ggcccctcagtcttgcttcctaccccgcgc 90
>31000_ppy-mir-423:mirbase
Length = 90
Score = 178 bits (90), Expect = 5e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 5 aggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctga 60
Query: 65 ggcccctcagtcttgcttcctaccccgcgc 94
||||||||||||||||||||||||||||||
Sbjct: 61 ggcccctcagtcttgcttcctaccccgcgc 90
>34089_ssc-mir-423:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 8 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
Query: 68 ccctcagtcttgcttcctac 87
||||||||||||||||||||
Sbjct: 61 ccctcagtcttgcttcctac 80
>34090_ssc-mir-423:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 8 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 60
Query: 68 ccctcagtcttgcttcctac 87
||||||||||||||||||||
Sbjct: 61 ccctcagtcttgcttcctac 80
>32908_rno-mir-423:mirbase
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 7 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgagg 60
Query: 67 cccctcagtcttgcttcct 85
|||||||||||||||||||
Sbjct: 61 cccctcagtcttgcttcct 79
>29349_hsa-mir-3184:mirbase
Length = 75
Score = 149 bits (75), Expect = 4e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 8 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aagttaggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggc 16
Query: 68 ccctcagtcttgctt 82
|||||||||||||||
Sbjct: 15 ccctcagtcttgctt 1
>27173_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 6e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 13 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 60
Query: 73 agt 75
|||
Sbjct: 61 agt 63
>27174_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 6e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 13 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggctgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctc 60
Query: 73 agt 75
|||
Sbjct: 61 agt 63
>26840_cfa-mir-423a:mirbase
Length = 59
Score = 117 bits (59), Expect = 1e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 17 tgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctcagt 75
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaggggcagagagcgagacttttctattttccaaaagctcggtctgaggcccctcagt 59
