miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00639;mir-515;EU086470.1/75731-75816 61621:Rhinopithecus bieti
(Black snub-nosed monkey)
Length = 86
Score = 115 bits (58), Expect = 9e-26
Identities = 80/86 (93%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 1 ctcatgcagtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgca 60
|||| |||||||||||||||||||||||||||||||| || |||| ||||||||||||||
Sbjct: 2 ctcaggcagtgaccctctagatggaagcactgtctgttgtataaa-gaaaagatcgtgca 60
Query: 61 tccttttagagtgttaccgtttgaga 86
||| ||||||||||||| ||||||||
Sbjct: 61 tccctttagagtgttactgtttgaga 86
>RF00639;mir-515;AANU01181651.1/3882-3966 9544:Macaca mulatta
(rhesus monkey)
Length = 85
Score = 93.7 bits (47), Expect = 3e-19
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 1 ctcatgcagtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgca 60
||||||||||||| ||||| |||| |||||||||||||||||||| | |||||||||||
Sbjct: 2 ctcatgcagtgacactctaaatggcagcactgtctgtggtctaaa--acaagatcgtgca 59
Query: 61 tccttttagagtgttaccgtttgaga 86
|||||||||||||||| || |||||
Sbjct: 60 gccttttagagtgttactgtgtgaga 85
>RF00665;mir-290;AANU01181659.1/9779-9861 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 87.7 bits (44), Expect = 2e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
||||||||||||| |||||| || |||||||||| |||||||||| |||| ||||||||
Sbjct: 8 gtgaccctctagagggaagcgctttctgtggtctgaaagaaaagaaagtgcttcctttta 67
Query: 69 gagtgttaccgtttga 84
||| ||||||||||||
Sbjct: 68 gagggttaccgtttga 83
>RF00639;mir-515;AC200331.2/94909-94823 9601:Pongo abelii
(Sumatran orangutan)
Length = 87
Score = 75.8 bits (38), Expect = 8e-14
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
||||||||||| | ||||||||| ||||| |||| ||||||| || |||||||||||||
Sbjct: 10 gtgaccctctacagggaagcactttctgttgtctgaaagaaaggaaagtgcatcctttta 69
Query: 69 gagtgttaccgtttgaga 86
|||||| || ||||||||
Sbjct: 70 gagtgtgactgtttgaga 87
>RF00639;mir-515;EU086470.1/47844-47930 61621:Rhinopithecus bieti
(Black snub-nosed monkey)
Length = 87
Score = 69.9 bits (35), Expect = 5e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
||||||||||| | ||||||||| ||||||||| ||||||||| |||| ||||||||
Sbjct: 10 gtgaccctctaaagggaagcactttctgtggtcagaaagaaaagcaagtgcttcctttta 69
Query: 69 gagtgttaccgtttg 83
||| |||||||||||
Sbjct: 70 gagggttaccgtttg 84
>RF00639;mir-515;EU086472.1/43214-43300 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
||||||||||| | ||||||||| |||| ||| || ||||||| |||||||||| ||
Sbjct: 10 gtgaccctctacaaggaagcacttcctgttgtcagaatgaaaagaaagtgcatccttgta 69
Query: 69 gagtgttaccgtttgaga 86
||||||||||||||||||
Sbjct: 70 gagtgttaccgtttgaga 87
>RF00639;mir-515;EU086472.1/59369-59455 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
|||||| |||| | |||||| || ||||| ||||||||||||||| |||||||||| ||
Sbjct: 10 gtgaccgtctacagggaagcgctttctgttgtctaaaagaaaagaaagtgcatccttgta 69
Query: 69 gagtgttaccgtttgaga 86
||| ||||| ||||||||
Sbjct: 70 gagagttactgtttgaga 87
>RF00639;mir-515;AANU01181661.1/11625-11711 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
||||||||||||| ||||||||| ||||| || | |||||||||| ||||||| |||||
Sbjct: 10 gtgaccctctagaaggaagcactttctgttgtttgaaagaaaagaaagtgcatcatttta 69
Query: 69 gagtgttaccgtttgaga 86
||| |||| ||||||||
Sbjct: 70 gaggattacagtttgaga 87
>RF00665;mir-290;CABD01563075.1/640-558 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 63.9 bits (32), Expect = 3e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 13 ccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatccttttagagt 72
||||||| | |||||| || ||||| |||| ||||||| || |||||||||||||||||
Sbjct: 12 ccctctacagggaagcgctttctgttgtctgaaagaaaggaaagtgcatccttttagagt 71
Query: 73 gttaccgtttga 84
||||| ||||||
Sbjct: 72 gttactgtttga 83
>RF00665;mir-290;CABD01093351.1/5763-5845 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 61.9 bits (31), Expect = 1e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
||||||||||| | |||||| || ||||||||| ||||||||| |||| ||||||||
Sbjct: 8 gtgaccctctaaagggaagcgctttctgtggtcagaaagaaaagcaagtgcttcctttta 67
Query: 69 gagtgttaccgtttg 83
||| |||||||||||
Sbjct: 68 gagggttaccgtttg 82
>RF00639;mir-515;EU086472.1/139625-139711 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 60.0 bits (30), Expect = 5e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
||||||||||||| |||||| ||||| |||||||||||||| | |||| |||| ||
Sbjct: 10 gtgaccctctagagggaagcgtgttctgtattctaaaagaaaagaacttgcagccttgta 69
Query: 69 gagtgttaccgtttgaga 86
||||||||| ||||||||
Sbjct: 70 gagtgttactgtttgaga 87
>RF00639;mir-515;CABD01077414.1/17039-16953 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 87
Score = 58.0 bits (29), Expect = 2e-08
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 14 cctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatccttttagagtg 73
|||| ||| ||||| ||| ||||| |||| | |||||||| |||| |||||||| || |
Sbjct: 15 cctcyagagggaagyactttctgttgtctgagagaaaagaaagtgcttccttttaaaggg 74
Query: 74 ttaccgtttgaga 86
|||||||||||||
Sbjct: 75 ttaccgtttgaga 87
>RF00639;mir-515;EU086470.1/45033-45119 61621:Rhinopithecus bieti
(Black snub-nosed monkey)
Length = 87
Score = 58.0 bits (29), Expect = 2e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 26 agcactgtctgtggtctaaaagaaaagatcgtgcatccttttagagtgttaccgtttgag 85
|||||| ||||| |||| |||||||| | |||| ||||||||||||||||| |||||||
Sbjct: 27 agcactttctgttgtctgaaagaaaacaaagtgcctccttttagagtgttactgtttgag 86
Query: 86 a 86
|
Sbjct: 87 a 87
>RF00639;mir-515;AANU01181654.1/9592-9678 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 58.0 bits (29), Expect = 2e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 1 ctcatgcagtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgca 60
||||||| ||||||||| | | |||| |||| ||||| ||||||||||||||| | ||
Sbjct: 2 ctcatgctgtgaccctccaaagggaaacactttctgttgtctaaaagaaaagaaggcgcg 61
Query: 61 tccttttagagtgttaccgtttgag 85
||| ||| ||||||||| |||||||
Sbjct: 62 tccctttggagtgttacagtttgag 86
>RF00639;mir-515;CABD01442931.2/227-141 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 87
Score = 56.0 bits (28), Expect = 7e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 3 catgcagtgaccctctagatggaagcactgtctgtggtctaaaagaaa 50
||||| ||||||||||||| ||||||||| ||||| |||| |||||||
Sbjct: 4 catgctgtgaccctctagagggaagcactttctgttgtctgaaagaaa 51
>RF00639;mir-515;EU086470.1/80061-80147 61621:Rhinopithecus bieti
(Black snub-nosed monkey)
Length = 87
Score = 56.0 bits (28), Expect = 7e-08
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 23 ggaagcactgtctgtggtctaaaagaaaagatcgtgcatccttttagagtgttaccgttt 82
||||| ||| ||||| ||||||||||||||| || | ||| |||||||||||||||| |
Sbjct: 24 ggaagaactttctgttgtctaaaagaaaagaacgcacttccctttagagtgttaccgtgt 83
Query: 83 gaga 86
||||
Sbjct: 84 gaga 87
>RF00639;mir-515;AANU01181659.1/3404-3490 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 54.0 bits (27), Expect = 3e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 12 accctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatccttttagag 71
|||||||||| |||||| || ||||| |||| | ||| |||| ||||||||||||||||
Sbjct: 13 accctctagagggaagcgctttctgtcgtctgagagagaagaaagtgcatccttttagag 72
Query: 72 tgttaccgtttgaga 86
|||| ||||||||
Sbjct: 73 gattacggtttgaga 87
>RF00639;mir-515;EU086472.1/58206-58292 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 1 ctcatgcagtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgca 60
||||||| ||| ||||||| | ||||||| | ||||| | | |||||||||| | ||
Sbjct: 2 ctcatgctgtgcccctctaaagggaagcattttctgttatttgaaagaaaagaactcgct 61
Query: 61 tccttttagagtgttaccgtttgaga 86
||| ||||||||||||||||||||||
Sbjct: 62 tccctttagagtgttaccgtttgaga 87
>RF00639;mir-515;CABD01614988.1/683-769 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 13 ccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatccttttagagt 72
||||||| | |||||| || ||||| |||| |||||||||| |||| |||||||||||
Sbjct: 14 ccctctacagggaagcgctttctgttgtctgaaagaaaagaaagtgcttccttttagagg 73
Query: 73 gttaccgttt 82
||| ||||||
Sbjct: 74 gttgccgttt 83
>RF00639;mir-515;AANU01156321.1/745-831 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
|||||||| |||| ||||||||| ||||| |||| ||| ||||| ||||||||||| |
Sbjct: 10 gtgaccctttagagggaagcactttctgttgtctgaaaacaaagaatgtgcatcctttca 69
Query: 69 gagtgttaccgtttgaga 86
||| ||||| |||||||
Sbjct: 70 gagggttactctttgaga 87
>RF00639;mir-515;AANU01181649.1/7445-7531 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 52.0 bits (26), Expect = 1e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
||||||||||||| |||||| | |||||| ||| |||||||||| || ||| ||||
Sbjct: 10 gtgaccctctagagggaagcgatttctgtgatctgaaagaaaagaaaatggttcccttta 69
Query: 69 gagtgttaccgtttgaga 86
||||||||| ||||||||
Sbjct: 70 gagtgttactgtttgaga 87
>RF00639;mir-515;EU086472.1/119430-119502 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 73
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaaga 53
||||||||||||| |||| |||| ||||| |||| ||||||||||
Sbjct: 10 gtgaccctctagagggaatcactttctgttgtctgaaagaaaaga 54
>RF00639;mir-515;EU086472.1/120525-120613 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 89
Score = 50.1 bits (25), Expect = 5e-06
Identities = 67/80 (83%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtct--aaaagaaaagatcgtgcatccttt 66
|||| |||||||| |||||||| |||||| ||| |||| |||||| | |||| ||||
Sbjct: 10 gtgatcctctagagggaagcacgttctgtgttctgaaaaaaaaaagaacttgcagccttg 69
Query: 67 tagagtgttaccgtttgaga 86
||||||||||||||| ||||
Sbjct: 70 tagagtgttaccgttagaga 89
>RF00639;mir-515;EU086470.1/90144-90230 61621:Rhinopithecus bieti
(Black snub-nosed monkey)
Length = 87
Score = 50.1 bits (25), Expect = 5e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1 ctcatgcagtgaccctctagatggaagcactgtctgtggtctaaaagaaaaga 53
||||||| ||||||||||||| |||||| || ||||| | || ||||||||||
Sbjct: 2 ctcatgctgtgaccctctagagggaagcgctttctgttggctcaaagaaaaga 54
>RF00639;mir-515;AANU01181659.1/6633-6719 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaaga 53
||||||||||||| ||||||||| ||||| |||| |||||||||
Sbjct: 10 gtgaccctctagagggaagcactttctgttgtctggaagaaaaga 54
>RF00639;mir-515;EU086472.1/40574-40660 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 27 gcactgtctgtggtctaaaagaaaagatcgtgcatccttttagagtgttaccgtttgaga 86
||||| ||||| ||| ||||||||||| |||| ||| |||||||||| || ||||||||
Sbjct: 28 gcactttctgttgtcaaaaagaaaagaaagtgcttccctttagagtgtgacggtttgaga 87
>RF00639;mir-515;EU086470.1/64981-65067 61621:Rhinopithecus bieti
(Black snub-nosed monkey)
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 1 ctcatgcagtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgca 60
||||||| ||||||||||||| ||||| || ||||| | || |||||||||| || ||
Sbjct: 2 ctcatgctgtgaccctctagagggaagtgctttctgttgcctgaaagaaaagaacgcgct 61
Query: 61 tccttttagagtgttaccgtttg 83
||| | ||||| |||||| ||||
Sbjct: 62 tccctatagagggttaccctttg 84
>RF00639;mir-515;AANU01181659.1/2591-2677 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 9 gtgaccctctagatggaagcactgtctgtggtctaaaagaaaagatcgtgcatcctttta 68
|||||||||| || ||||||||| ||||| |||| || |||||| |||| ||||||||
Sbjct: 10 gtgaccctcttgagggaagcactttctgttgtctgaataaaaagaaagtgcttcctttta 69
Query: 69 gag 71
|||
Sbjct: 70 gag 72
>RF00639;mir-515;AANU01181649.1/17672-17755 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 56 gtgcatccttttagagtgttaccgtttgaga 86
|||||||||||||||||||||| |||||||
Sbjct: 54 gtgcatccttttagagtgttactatttgaga 84
>RF00639;mir-515;EU086472.1/102140-102226 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tttagagtgttaccgtttgaga 86
||||||||||||||||||||||
Sbjct: 66 tttagagtgttaccgtttgaga 87
>RF00639;mir-515;EU086472.1/87078-87164 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tttagagtgttaccgtttgaga 86
||||||||||||||||||||||
Sbjct: 66 tttagagtgttaccgtttgaga 87
>RF00639;mir-515;EU086472.1/71364-71449 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tttagagtgttaccgtttgaga 86
||||||||||||||||||||||
Sbjct: 65 tttagagtgttaccgtttgaga 86
>RF00639;mir-515;EU086472.1/46577-46663 9509:Ateles geoffroyi
(black-handed spider monkey)
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tttagagtgttaccgtttgaga 86
||||||||||||||||||||||
Sbjct: 66 tttagagtgttaccgtttgaga 87
>RF00639;mir-515;AANU01181657.1/1054-1140 9544:Macaca mulatta
(rhesus monkey)
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 25 aagcactgtctgtggtctaaaagaaaagatcgtgcatccttttagagtgttaccgtttga 84
||||||| ||| | ||||||||||||||| |||| ||| ||| |||||||| ||||||
Sbjct: 26 aagcactttctcttgtctaaaagaaaagaaggtgcttccctttgcagtgttacggtttga 85
Query: 85 ga 86
||
Sbjct: 86 ga 87
