miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01016;mir-584;AANU01185361.1/45786-45882 9544:Macaca mulatta
(rhesus monkey)
Length = 97
Score = 192 bits (97), Expect = 6e-49
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggatatgtcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggatatgtcagtt 60
Query: 61 ccaggccaaccaggctggttggtttccctgaagcaac 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaggccaaccaggctggttggtttccctgaagcaac 97
>RF01016;mir-584;ABDC01013647.1/516-397 30608:Microcebus murinus
(gray mouse lemur)
Length = 120
Score = 60.0 bits (30), Expect = 6e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 4 ggtgaccagccattatggtttgcctgggactgaggaatttgctgggatat 53
|||||||||||||| |||| ||||||||||||| | |||| |||||||||
Sbjct: 4 ggtgaccagccattctggtgtgcctgggactgatggatttcctgggatat 53
>RF01016;mir-584;AANU01255500.1/13662-13541 9544:Macaca mulatta
(rhesus monkey)
Length = 122
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 3 gggtgaccagccattatggtttgcctgggactgagg 38
|||||||||||||| ||||||||||||||||||||
Sbjct: 3 gggtgaccagccatcctggtttgcctgggactgagg 38
>RF01016;mir-584;AAFC03038057.1/75118-75238 9913:Bos taurus
(cattle)
Length = 121
Score = 54.0 bits (27), Expect = 3e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggat 51
||||||||||| | || ||||||||||||||||||| ||||| |||||||
Sbjct: 1 tagggtgaccaactatcctggtttgcctgggactgagaaatttcctgggat 51
>RF01016;mir-584;AANU01251414.1/23474-23570 9544:Macaca mulatta
(rhesus monkey)
Length = 97
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactg 35
|||||||||||||||| | ||||||||||||||||
Sbjct: 1 tagggtgaccagccatcagggtttgcctgggactg 35
>RF01016;mir-584;ABRR01351750.1/4392-4512 30538:Lama pacos (alpaca)
Length = 121
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1 tagggtgaccagccattatggtttgcctgggactgagg 38
|||||||||||||||| ||||||||||| ||||||||
Sbjct: 114 tagggtgaccagccatcctggtttgcctgagactgagg 77
>RF01016;mir-584;AAGV020502691.1/1539-1658 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 120
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggac 33
||||||||||| |||| ||||||||||||||||
Sbjct: 1 tagggtgaccaaccatcatggtttgcctgggac 33
>RF01016;mir-584;ACBE01108073.1/873-755 9685:Felis catus (domestic
cat)
Length = 119
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 5 gtgaccagccattatggtttgcctgggactgag 37
||||||||||||| | |||||||||||||||||
Sbjct: 5 gtgaccagccattttagtttgcctgggactgag 37
>RF01016;mir-584;CABD01314427.2/9379-9261 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 119
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 2 agggtgaccagccattatggtttgcctgggactgagg 38
|||||||||| | ||| ||||||||||||||||||||
Sbjct: 111 agggtgaccaactattctggtttgcctgggactgagg 75
>RF01016;mir-584;ABVD01316193.1/1212-1096 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 117
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactga 36
|||| ||||||||||| ||||||||||||||||||
Sbjct: 1 taggatgaccagccatactggtttgcctgggactga 36
>RF01016;mir-584;ABVD01128281.1/13226-13123 9358:Choloepus
hoffmanni (Hoffmann's two-fingered sloth)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 gtgaccagccattatggtttgcctgggactga 36
|||||||||||| ||||||||||||||||||
Sbjct: 93 gtgaccagccatcctggtttgcctgggactga 62
>RF01016;mir-584;AAWR02024830.1/6199-6318 9796:Equus caballus
(horse)
Length = 120
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 19 tggtttgcctgggactgaggaatttgctgggatatg 54
||||||||||||||||||||| || ||||||||||
Sbjct: 19 tggtttgcctgggactgaggaggttcctgggatatg 54
>RF01016;mir-584;AAWR02013102.1/63891-63990 9796:Equus caballus
(horse)
Length = 100
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactga 36
||||||||||||||| ||||||||||||||||||
Sbjct: 1 tagggtgaccagccaccctggtttgcctgggactga 36
>RF01016;mir-584;ABRN01000173.1/4000-4095 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctggga 32
||||||||||||| ||| ||||||||||||||
Sbjct: 1 tagggtgaccagctattctggtttgcctggga 32
>RF01016;mir-584;CABD01774274.1/379-260 9595:Gorilla gorilla gorilla
(Western lowland gorilla)
Length = 120
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 6 tgaccagccattatggtttgcctgggactgag 37
|||||| ||||| |||||||||||||||||||
Sbjct: 108 tgaccaaccattttggtttgcctgggactgag 77
>RF01016;mir-584;AANU01250089.1/6708-6827 9544:Macaca mulatta
(rhesus monkey)
Length = 120
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 21 gtttgcctgggactgaggaatttgctgg 48
||||||||||||||||||||||| ||||
Sbjct: 93 gtttgcctgggactgaggaatttcctgg 66
>RF01016;mir-584;AANU01123034.1/9753-9634 9544:Macaca mulatta
(rhesus monkey)
Length = 120
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 2 agggtgaccagccattatggtttgcctgggac 33
||||||||||||||| |||||||||||||||
Sbjct: 112 agggtgaccagccatcctggtttgcctgggac 81
>RF01016;mir-584;AAGU02443726.1/193-70 9785:Loxodonta africana
(African savanna elephant)
Length = 124
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctggga 32
|||||||||||||||| ||||||||||||||
Sbjct: 1 tagggtgaccagccatcctggtttgcctggga 32
>RF01016;mir-584;AAGV020139566.1/1624-1748 9361:Dasypus novemcinctus
(nine-banded armadillo)
Length = 125
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 8 accagccattatggtttgcctgggactgagg 38
|||||||||| |||||||||||||| |||||
Sbjct: 111 accagccattctggtttgcctgggattgagg 81
>RF01016;mir-584;AAWR02024077.1/7850-7748 9796:Equus caballus
(horse)
Length = 103
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtttgcctgggactgaggaattt 43
|||||||||||||||||||||||
Sbjct: 21 gtttgcctgggactgaggaattt 43
>RF01016;mir-584;ABRN01369076.1/288-408 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 121
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgagga 39
||||||||||||| | |||||||||||||||||||||
Sbjct: 1 tagggtgaccagctgtcctggtttgcctgggactgagga 39
>RF01016;mir-584;ABRN01262800.1/1870-1988 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 119
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 tagggtgaccagccattatggtttgcctgggactg 35
||||||||||| |||| |||||||||||||||||
Sbjct: 112 tagggtgaccaaccatcctggtttgcctgggactg 78
>RF01016;mir-584;ACBE01154146.1/6099-5995 9685:Felis catus
(domestic cat)
Length = 105
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtttgcctgggactgaggaattt 43
|||||||||||||||||||||||
Sbjct: 21 gtttgcctgggactgaggaattt 43
>RF01016;mir-584;AAPY01703534.1/2732-2850 37347:Tupaia belangeri
(northern tree shrew)
Length = 119
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcc 27
||||||||||||||||| |||||||||
Sbjct: 1 tagggtgaccagccattttggtttgcc 27
>RF01016;mir-584;ABDC01353509.1/950-830 30608:Microcebus murinus
(gray mouse lemur)
Length = 121
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctgggat 51
||||||||||| |||| |||||| ||||| ||||||| |||| |||||||
Sbjct: 1 tagggtgaccaaccatcctggtttacctggaactgagggatttcctgggat 51
>RF01016;mir-584;ABDC01664821.1/171-289 30608:Microcebus murinus
(gray mouse lemur)
Length = 119
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 20 ggtttgcctgggactgaggaatttgctggga 50
|||||||||||||||||||| ||| ||||||
Sbjct: 20 ggtttgcctgggactgaggagtttcctggga 50
>RF01016;mir-584;ABGA01056032.1/17736-17641 9601:Pongo abelii
(Sumatran orangutan)
Length = 96
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactg 35
||||||||| |||||| | ||||||||||||||||
Sbjct: 1 tagggtgactagccatcagggtttgcctgggactg 35
>RF01016;mir-584;ABVD01562735.1/478-597 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 120
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2 agggtgaccagccattatggtttgcctgggactgagga 39
|||||||||| ||||| | |||| ||||||||||||||
Sbjct: 2 agggtgaccaaccattctagttttcctgggactgagga 39
>RF01016;mir-584;AAGV020724018.1/628-745 9361:Dasypus novemcinctus
(nine-banded armadillo)
Length = 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgaggaatttgctggga 50
||||||||||| |||| ||||||||| |||||||||| ||| ||||||
Sbjct: 1 tagggtgaccaaccatcctggtttgcccaggactgaggagtttcctggga 50
>RF01016;mir-584;AAWR02015671.1/174191-174072 9796:Equus caballus
(horse)
Length = 120
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 4 ggtgaccagccattatggtttgcctgggactgaggaatttgctggg 49
|||||||| |||| |||| |||||||||||||| ||||| |||||
Sbjct: 4 ggtgaccaaccatcctggtgtgcctgggactgagaaatttcctggg 49
>RF01016;mir-584;AAWR02025191.1/22382-22266 9796:Equus caballus
(horse)
Length = 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgagg 38
|||||||||||||||| |||||||||| ||||||||
Sbjct: 1 tagggtgaccagccatcctggtttgccttagactgagg 38
>RF01016;mir-584;AAPE01450845.1/721-601 59463:Myotis lucifugus
(little brown bat)
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 5 gtgaccagccattatggtttgcctgggactgagg 38
||||||| || || ||||||||||||||||||||
Sbjct: 110 gtgaccaaccgttctggtttgcctgggactgagg 77
>RF01016;mir-584;ABRN01381075.1/13595-13476 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 120
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgagg 38
|||||||||||||||| ||||||||| |||||||||
Sbjct: 1 tagggtgaccagccatcctggtttgcccaggactgagg 38
>RF01016;mir-584;ABRN01354974.1/7154-7037 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 118
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggact 34
||||||||||| |||| ||||||||||||||||
Sbjct: 1 tagggtgaccaaccatcctggtttgcctgggact 34
>RF01016;mir-584;ABRN01432034.1/7542-7660 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 21 gtttgcctgggactgaggaatttgctggga 50
||||||||||||||||||| ||| ||||||
Sbjct: 21 gtttgcctgggactgaggagtttcctggga 50
>RF01016;mir-584;AANG01432103.1/1786-1668 9685:Felis catus
(domestic cat)
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgagg 38
||||||||||| |||| ||||||||||| ||||||||
Sbjct: 1 tagggtgaccaaccatactggtttgcctgagactgagg 38
>RF01016;mir-584;AAEX02003971.1/14108-13989 9615:Canis lupus
familiaris (dog)
Length = 120
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 21 gtttgcctgggactgaggaatttgctggga 50
|||||||||||||||||| |||| ||||||
Sbjct: 21 gtttgcctgggactgagggattttctggga 50
>RF01016;mir-584;ABRT010190999.1/452-572 9478:Tarsius syrichta
(Philippine tarsier)
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggact 34
|||||||||||||||| |||||||||| |||||
Sbjct: 1 tagggtgaccagccatcctggtttgcctaggact 34
>RF01016;mir-584;ABGA01340049.1/1232-1347 9601:Pongo abelii
(Sumatran orangutan)
Length = 116
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 2 agggtgaccagccattatggtttgcctgggactg 35
|||||||||| |||| |||||||||||||||||
Sbjct: 2 agggtgaccaaccatcttggtttgcctgggactg 35
>RF01016;mir-584;AANU01292755.1/11505-11633 9544:Macaca mulatta
(rhesus monkey)
Length = 129
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1 tagggtgaccagccattatggtttgcctgggact 34
||||||||||| ||||| |||||||||| |||||
Sbjct: 122 tagggtgaccaaccattctggtttgcctaggact 89
>RF01016;mir-584;AAGU02277663.1/1140-1020 9785:Loxodonta africana
(African savanna elephant)
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 tagggtgaccagccattatggtttgcctgggactgagg 38
||||||||||| |||| |||||||||||||| |||||
Sbjct: 1 tagggtgaccaaccatcttggtttgcctgggattgagg 38
