miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28064_mml-mir-628:mirbase
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
Query: 61 tctagtaagagtggcagtcgaagggaaggactcat 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tctagtaagagtggcagtcgaagggaaggactcat 95
>26891_cfa-mir-628:mirbase
Length = 95
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
Query: 61 tctagtaagagtggcagtcgaagggaaggactcat 95
||||||||||||||||||||||||||||| |||||
Sbjct: 61 tctagtaagagtggcagtcgaagggaagggctcat 95
>27244_eca-mir-628a:mirbase
Length = 95
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
Query: 61 tctagtaagagtggcagtcgaagggaaggactcat 95
||||||||||||||||||||||||||||| |||||
Sbjct: 61 tctagtaagagtggcagtcgaagggaagggctcat 95
>28944_hsa-mir-628:mirbase
Length = 95
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
Query: 61 tctagtaagagtggcagtcgaagggaaggactcat 95
||||||||||||||||||||||||||||| |||||
Sbjct: 61 tctagtaagagtggcagtcgaagggaagggctcat 95
>28945_hsa-mir-628:mirbase
Length = 95
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
Query: 61 tctagtaagagtggcagtcgaagggaaggactcat 95
||||||||||||||||||||||||||||| |||||
Sbjct: 61 tctagtaagagtggcagtcgaagggaagggctcat 95
>31204_ppy-mir-628:mirbase
Length = 95
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
Query: 61 tctagtaagagtggcagtcgaagggaaggactcat 95
||||||||||||||||||||||||||||| |||||
Sbjct: 61 tctagtaagagtggcagtcgaagggaagggctcat 95
>31205_ppy-mir-628:mirbase
Length = 95
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
Query: 61 tctagtaagagtggcagtcgaagggaaggactcat 95
||||||||||||||||||||||||||||| |||||
Sbjct: 61 tctagtaagagtggcagtcgaagggaagggctcat 95
>33435_bta-mir-628:mirbase
Length = 95
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
Query: 61 tctagtaagagtggcagtcgaagggaaggactcat 95
||||||||||||||||||||||||||||| |||||
Sbjct: 61 tctagtaagagtggcagtcgaagggaagggctcat 95
>30556_ptr-mir-628:mirbase
Length = 94
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataacct 60
Query: 61 tctagtaagagtggcagtcgaagggaaggactca 94
||||||||||||||||||||||||||||| ||||
Sbjct: 61 tctagtaagagtggcagtcgaagggaagggctca 94
>34125_ssc-mir-628:mirbase
Length = 80
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 10 gtgtcacttcctcatgctgacatatttactagagggtaaaattaataaccttctagtaag 69
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 1 gtgtcacttcctcatgctgacatatttactagagggtaaagttaacaaccttctagtaag 60
Query: 70 agtggcagtcgaagggaagg 89
||||||||||||||||||||
Sbjct: 61 agtggcagtcgaagggaagg 80
>32964_rno-mir-628:mirbase
Length = 84
Score = 103 bits (52), Expect = 2e-23
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 3 agctgttgtgtcacttcctcatgctgacatatttactagagggtaaaattaataaccttc 62
|||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 1 agctgttgtgtcgcttcctcatgctgacatatttacgagagggtgcaattcataaccttc 60
Query: 63 tagtaagagtggcagt 78
| ||||||||||||||
Sbjct: 61 tggtaagagtggcagt 76
