miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P31687|4CL2_SOYBN 4-coumarate--CoA ligase 2 OS=Glycine max PE=2
SV=2
Length = 562
Score = 50.1 bits (118), Expect = 4e-06
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +2
Query: 2 SVVSEANESELPEVSINSDDPVALPFSSGTT 94
SV+SEANES++PEV I+ DD VA+PFSSGTT
Sbjct: 181 SVLSEANESDVPEVEIHPDDAVAMPFSSGTT 211
>sp|P14912|4CL1_PETCR 4-coumarate--CoA ligase 1 OS=Petroselinum
crispum GN=4CL1 PE=2 SV=1
Length = 544
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +2
Query: 2 SVVSEANESELPEVSINSDDPVALPFSSGTT 94
S + EA+ESE+PEV INSDD VALP+SSGTT
Sbjct: 164 SKLMEADESEMPEVVINSDDVVALPYSSGTT 194
>sp|P14913|4CL2_PETCR 4-coumarate--CoA ligase 1 OS=Petroselinum
crispum GN=4CL2 PE=2 SV=1
Length = 544
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 2 SVVSEANESELPEVSINSDDPVALPFSSGTT 94
S + EA+ESE+PEV I+SDD VALP+SSGTT
Sbjct: 164 SKLMEADESEMPEVVIDSDDVVALPYSSGTT 194
>sp|Q42982|4CL2_ORYSJ Probable 4-coumarate--CoA ligase 2 OS=Oryza
sativa subsp. japonica GN=4CL2 PE=2 SV=2
Length = 569
Score = 45.8 bits (107), Expect = 8e-05
Identities = 19/30 (63%), Positives = 27/30 (90%)
Frame = +2
Query: 5 VVSEANESELPEVSINSDDPVALPFSSGTT 94
++++A+E +PEV+I+ DDPVALPFSSGTT
Sbjct: 194 LIADADEGSVPEVAISPDDPVALPFSSGTT 223
>sp|O24146|4CL2_TOBAC 4-coumarate--CoA ligase 2 OS=Nicotiana tabacum
GN=4CL2 PE=2 SV=1
Length = 542
Score = 45.1 bits (105), Expect = 1e-04
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2
Query: 2 SVVSEANESELPEVSINSDDPVALPFSSGTT 94
SV+++ANE ++PEV I DD VALP+SSGTT
Sbjct: 163 SVLTQANEHDIPEVEIQPDDVVALPYSSGTT 193
