miRNEST 2.0, an integrative microRNA resource :: BLAST
>41644_vvi-MIR394b:mirbase
Length = 93
Score = 184 bits (93), Expect = 1e-47
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 33 acagagtttattggcattctgtccacctcccatctcttgaaaatctctcttttctctctg 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acagagtttattggcattctgtccacctcccatctcttgaaaatctctcttttctctctg 60
Query: 93 tggaggtgggcatactgccaaccaagctctgtt 125
|||||||||||||||||||||||||||||||||
Sbjct: 61 tggaggtgggcatactgccaaccaagctctgtt 93
>41424_ptc-MIR394b:mirbase
Length = 147
Score = 121 bits (61), Expect = 2e-28
Identities = 116/133 (87%), Gaps = 1/133 (0%)
Strand = Plus / Plus
Query: 20 caaagggtttctcacagagtttattggcattctgtccacctcccatctcttgaaaatctc 79
|||||||||||| |||||||||||||||||||||||||||||| |||| | |||| |
Sbjct: 15 caaagggtttcttacagagtttattggcattctgtccacctcctatctttagaaattaga 74
Query: 80 tcttttctctc-tgtggaggtgggcatactgccaaccaagctctgttggactctctttgt 138
| ||| || | ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 75 atatctctttcatatggaggtgggcatactgccaaccgagctctgttggtctctctttgt 134
Query: 139 aaaaccctcgtga 151
|||||||||||||
Sbjct: 135 aaaaccctcgtga 147
>41423_ptc-MIR394b:mirbase
Length = 147
Score = 121 bits (61), Expect = 2e-28
Identities = 116/133 (87%), Gaps = 1/133 (0%)
Strand = Plus / Plus
Query: 20 caaagggtttctcacagagtttattggcattctgtccacctcccatctcttgaaaatctc 79
|||||||||||| |||||||||||||||||||||||||||||| |||| | |||| |
Sbjct: 15 caaagggtttcttacagagtttattggcattctgtccacctcctatctttagaaattaga 74
Query: 80 tcttttctctc-tgtggaggtgggcatactgccaaccaagctctgttggactctctttgt 138
| ||| || | ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 75 atatctctttcatatggaggtgggcatactgccaaccgagctctgttggtctctctttgt 134
Query: 139 aaaaccctcgtga 151
|||||||||||||
Sbjct: 135 aaaaccctcgtga 147
>41422_ptc-MIR394a:mirbase
Length = 147
Score = 103 bits (52), Expect = 4e-23
Identities = 127/148 (85%), Gaps = 3/148 (2%)
Strand = Plus / Plus
Query: 6 tcatatgggtttgacaaagggtttctcacagagtttattggcattctgtccacctcccat 65
|||| ||||||| |||||||||||| ||||||||| |||||||||||||||||||| ||
Sbjct: 1 tcatgtgggttttgcaaagggtttcttacagagttttttggcattctgtccacctcc-at 59
Query: 66 ctcttgaaaatctctctt-ttct-ctctgtggaggtgggcatactgccaaccaagctctg 123
|| | |||| | || |||| || | |||||||||||||||||||||| |||||||
Sbjct: 60 ctgtagaaactacaagttgttctactttctggaggtgggcatactgccaactgagctctg 119
Query: 124 ttggactctctttgtaaaaccctcgtga 151
|||| |||||||||||||||||||||||
Sbjct: 120 ttggtctctctttgtaaaaccctcgtga 147
>41421_ptc-MIR394a:mirbase
Length = 147
Score = 103 bits (52), Expect = 4e-23
Identities = 127/148 (85%), Gaps = 3/148 (2%)
Strand = Plus / Plus
Query: 6 tcatatgggtttgacaaagggtttctcacagagtttattggcattctgtccacctcccat 65
|||| ||||||| |||||||||||| ||||||||| |||||||||||||||||||| ||
Sbjct: 1 tcatgtgggttttgcaaagggtttcttacagagttttttggcattctgtccacctcc-at 59
Query: 66 ctcttgaaaatctctctt-ttct-ctctgtggaggtgggcatactgccaaccaagctctg 123
|| | |||| | || |||| || | |||||||||||||||||||||| |||||||
Sbjct: 60 ctgtagaaactacaagttgttctactttctggaggtgggcatactgccaactgagctctg 119
Query: 124 ttggactctctttgtaaaaccctcgtga 151
|||| |||||||||||||||||||||||
Sbjct: 120 ttggtctctctttgtaaaaccctcgtga 147
>41055_ghr-MIR394a:mirbase
Length = 167
Score = 73.8 bits (37), Expect = 3e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 3 ctttcatatgggtttgacaaagggtttctcacagagtttattggcattctgtccacctcc 62
||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 3 ctttcatgggggtttagcaaagggcttcttacagagtttattggcattctgtccacctcc 62
Query: 63 c 63
|
Sbjct: 63 c 63
Score = 63.9 bits (32), Expect = 3e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 93 tggaggtgggcatactgccaaccaagctctgttggactctctttgtaaaaccctcgtgat 152
|||||||||||||||||||||| |||||||||| ||||||||||||| ||| |||||
Sbjct: 105 tggaggtgggcatactgccaactgtgctctgttggcttctctttgtaaaatccttgtgat 164
>41134_tcc-MIR394a:mirbase
Length = 120
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 23 agggtttctcacagagtttattggcattctgtccacctcccatc 66
|||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 agggcttcttacagagtttattggcattctgtccacctcccatc 44
>41239_csi-MIR394:mirbase
Length = 147
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 28 ttctcacagagtttattggcattctgtccacctcc 62
|||| ||||||||||||||||||||||||||||||
Sbjct: 2 ttcttacagagtttattggcattctgtccacctcc 36
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 93 tggaggtgggcatactgccaaccaagctctgttgg 127
|||||||||||||||||||||| |||||||||||
Sbjct: 105 tggaggtgggcatactgccaactgagctctgttgg 139
>40471_gma-MIR394a:mirbase
Length = 157
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 20 caaagggtttctcacagagtttattggcattctgtccacctcc 62
||||| ||| || ||||||||||||||||||||||||||||||
Sbjct: 16 caaagtgttgctaacagagtttattggcattctgtccacctcc 58
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 93 tggaggtgggcatactgccaaccaagctctgttgg 127
||||||||||||||||| |||| |||||||||||
Sbjct: 98 tggaggtgggcatactgtcaactgagctctgttgg 132
>40472_gma-MIR394b:mirbase
Length = 104
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 33 acagagtttattggcattctgtccacctcc 62
||||||||||||||||||||||||||||||
Sbjct: 3 acagagtttattggcattctgtccacctcc 32
>39867_aly-MIR394a:mirbase
Length = 220
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 12 gggtttgacaaagggtttctcacagagtttattggcattctgtccacctcc 62
||||||||||||| |||||| ||||| | ||||||||||||||||||||
Sbjct: 37 gggtttgacaaagagtttcttacagacatctttggcattctgtccacctcc 87
>42790_zma-MIR394b:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctccc 63
|||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctccc 41
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tggaggtgggcatactgccaa 113
|||||||||||||||||||||
Sbjct: 83 tggaggtgggcatactgccaa 103
>42789_zma-MIR394a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tggaggtgggcatactgccaa 113
|||||||||||||||||||||
Sbjct: 87 tggaggtgggcatactgccaa 107
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>42569_sbi-MIR394b:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tggaggtgggcatactgccaa 113
|||||||||||||||||||||
Sbjct: 53 tggaggtgggcatactgccaa 73
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 2 ttggcattctgtccacctcc 21
>42000_osa-MIR394:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tggaggtgggcatactgccaa 113
|||||||||||||||||||||
Sbjct: 76 tggaggtgggcatactgccaa 96
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
>41776_bdi-MIR394:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tggaggtgggcatactgccaa 113
|||||||||||||||||||||
Sbjct: 125 tggaggtgggcatactgccaa 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 53 ttggcattctgtccacctcc 72
>42568_sbi-MIR394a:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>41645_vvi-MIR394c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>41643_vvi-MIR394a:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>41135_tcc-MIR394b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>41056_ghr-MIR394b:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 35 ttggcattctgtccacctcc 54
>40402_ahy-MIR394:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 22 ttggcattctgtccacctcc 41
>40078_ath-MIR394b:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 ggaggtgggcatactgccaa 113
||||||||||||||||||||
Sbjct: 88 ggaggtgggcatactgccaa 107
>40077_ath-MIR394a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
>39868_aly-MIR394b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 41 ttggcattctgtccacctcc 60
