miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28361_hsa-mir-15b:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
Query: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
>30043_ppa-mir-15b:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
Query: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
>30147_ptr-mir-15b:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
Query: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
>30752_ppy-mir-15b:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
Query: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
>27479_age-mir-15b:mirbase
Length = 98
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcga 60
Query: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
>27540_lla-mir-15b:mirbase
Length = 98
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcga 60
Query: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
>27651_mml-mir-15b:mirbase
Length = 98
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcga 60
Query: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
>28171_mne-mir-15b:mirbase
Length = 98
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcga 60
Query: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
>33129_bta-mir-15b:mirbase
Length = 98
Score = 178 bits (90), Expect = 5e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 ttgagaccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcga 60
Query: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
>33912_ssc-mir-15b:mirbase
Length = 98
Score = 178 bits (90), Expect = 5e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcga 60
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1 ttgaggccttaaagtactgtagcagcacatcatggtttacatactacaatcaagatgcga 60
Query: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcattatttgctgctctagaaatttaaggaaattcat 98
>32658_rno-mir-15b:mirbase
Length = 98
Score = 174 bits (88), Expect = 8e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaatcatt 66
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
Query: 67 atttgctgctctagaaatttaaggaaattcat 98
||||||||||||||||||||||||||||||||
Sbjct: 67 atttgctgctctagaaatttaaggaaattcat 98
>25892_gga-mir-15b:mirbase
Length = 91
Score = 133 bits (67), Expect = 3e-32
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 2 tgaggccttaaagtactgtagcagcacatcatggtttacatgctacagtcaagatgcgaa 61
||||||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||
Sbjct: 1 tgaggccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaa 60
Query: 62 tcattatttgctgctctagaaatttaaggaa 92
||||||||||||||| |||||||||||||||
Sbjct: 61 tcattatttgctgctttagaaatttaaggaa 91
>26946_eca-mir-15b:mirbase
Length = 64
Score = 119 bits (60), Expect = 4e-28
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 17 ctgtagcagcacatcatggtttacatgctacagtcaagatgcgaatcattatttgctgct 76
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgct 60
Query: 77 ctag 80
||||
Sbjct: 61 ctag 64
>31776_mmu-mir-15b:mirbase
Length = 64
Score = 119 bits (60), Expect = 4e-28
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 17 ctgtagcagcacatcatggtttacatgctacagtcaagatgcgaatcattatttgctgct 76
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgct 60
Query: 77 ctag 80
||||
Sbjct: 61 ctag 64
>26624_cfa-mir-15b:mirbase
Length = 60
Score = 111 bits (56), Expect = 9e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 20 tagcagcacatcatggtttacatgctacagtcaagatgcgaatcattatttgctgctcta 79
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgctcta 60
>31426_oan-mir-15b:mirbase
Length = 130
Score = 107 bits (54), Expect = 1e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 20 tagcagcacatcatggtttacatgctacagtcaagatgcgaatcattatttgctgctcta 79
||||||||||||||||||| |||| || || |||||||||||||||||||||||||| ||
Sbjct: 31 tagcagcacatcatggtttgcatggtatagccaagatgcgaatcattatttgctgcttta 90
Query: 80 gaaatttaaggaaa 93
||||||||||||||
Sbjct: 91 gaaatttaaggaaa 104
>26397_tgu-mir-15b:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 aagtactgtagcagcacatcatggtttacatgct 45
|||| |||||||||||||||||||||| ||||||
Sbjct: 3 aagtgctgtagcagcacatcatggtttgcatgct 36
>34204_dre-mir-15b:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 ctgtagcagcacatcatggttt 38
||||||||||||||||||||||
Sbjct: 36 ctgtagcagcacatcatggttt 57
>25893_gga-mir-15c:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgtagcagcacatcatggttt 38
|||||||||||||||||||||
Sbjct: 9 tgtagcagcacatcatggttt 29
>26398_tgu-mir-15c:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgtagcagcacatcatggttt 38
|||||||||||||||||||||
Sbjct: 12 tgtagcagcacatcatggttt 32
>31427_oan-mir-15c:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgtagcagcacatcatggttt 38
|||||||||||||||||||||
Sbjct: 26 tgtagcagcacatcatggttt 46
>25698_xtr-mir-15b:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 18 tgtagcagcacatcatggtttacatgct 45
||||||||||||||||| ||| ||||||
Sbjct: 14 tgtagcagcacatcatgatttgcatgct 41
