miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28506_hsa-mir-195:mirbase
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 agcttcctgggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggtg 87
|||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggtg 87
>30111_ppa-mir-195:mirbase
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 agcttcctgggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggtg 87
|||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggtg 87
>30886_ppy-mir-195:mirbase
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 agcttcctgggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggtg 87
|||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggtg 87
>30270_ptr-mir-195:mirbase
Length = 86
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 1 agcttcctgggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggt 86
||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggt 86
>27789_mml-mir-195:mirbase
Length = 87
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 1 agcttcctgggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcaagtctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggtg 87
|||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggtg 87
>27079_eca-mir-195:mirbase
Length = 94
Score = 139 bits (70), Expect = 4e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 10 ggctctagcagcacagaaatattggcacagggaagcgagtctgccaatattggctgtgct 69
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 16 ggctctagcagcacagaaatattggcactgggaagagagtctgccaatattggctgtgct 75
Query: 70 gctccaggcagggtggtg 87
||||||||||||||||||
Sbjct: 76 gctccaggcagggtggtg 93
>31914_mmu-mir-195:mirbase
Length = 94
Score = 131 bits (66), Expect = 9e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 10 ggctctagcagcacagaaatattggcacagggaagcgagtctgccaatattggctgtgct 69
||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 16 ggctctagcagcacagaaatattggcatggggaagtgagtctgccaatattggctgtgct 75
Query: 70 gctccaggcagggtggtg 87
||||||||||||||||||
Sbjct: 76 gctccaggcagggtggtg 93
>32782_rno-mir-195:mirbase
Length = 87
Score = 131 bits (66), Expect = 9e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 10 ggctctagcagcacagaaatattggcacagggaagcgagtctgccaatattggctgtgct 69
|||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 10 ggctctagcagcacagaaatattggcacgggtaagtgagtctgccaatattggctgtgct 69
Query: 70 gctccaggcagggtggtg 87
||||||||||||||||||
Sbjct: 70 gctccaggcagggtggtg 87
>33267_bta-mir-195:mirbase
Length = 87
Score = 123 bits (62), Expect = 2e-29
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 10 ggctctagcagcacagaaatattggcacagggaagcgagtctgccaatattggctgtgct 69
|||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||
Sbjct: 10 ggctctagcagcacagaaatattggcactgggaagaaagcctgccaatattggctgtgct 69
Query: 70 gctccaggcagggtggtg 87
||||||||||||||||||
Sbjct: 70 gctccaggcagggtggtg 87
>26751_cfa-mir-195:mirbase
Length = 61
Score = 101 bits (51), Expect = 8e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 15 tagcagcacagaaatattggcacagggaagcgagtctgccaatattggctgtgctgctc 73
||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 1 tagcagcacagaaatattggcactgggaagagagtctgccaatattggctgtgctgctc 59
>34025_ssc-mir-195:mirbase
Length = 80
Score = 91.7 bits (46), Expect = 8e-20
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 10 ggctctagcagcacagaaatattggcacagggaagcgagtctgccaatattggctgtgct 69
|||||||||||||||||||||||||||| ||| | |||||||||| |||||||||||||
Sbjct: 11 ggctctagcagcacagaaatattggcaccgggcggagagtctgccagtattggctgtgct 70
Query: 70 gctccaggca 79
|| |||||||
Sbjct: 71 gccccaggca 80
>27415_mdo-mir-195:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 10 ggctctagcagcacagaaatattggcac 37
|||| |||||||||| ||||||||||||
Sbjct: 5 ggctttagcagcacaaaaatattggcac 32
