miRNEST 2.0, an integrative microRNA resource :: BLAST
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 74 ggaagctcaagaaagctgtgggaaaacatgg 104
|||||||||||||||||||||||||||||||
Sbjct: 108 ggaagctcaagaaagctgtgggaaaacatgg 138
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 3 catgctattccacagctttcttgaactttctt 34
|||||| |||||||||||||||||||||||||
Sbjct: 14 catgcttttccacagctttcttgaactttctt 45
>40086_ath-MIR396b:mirbase
Length = 135
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 73 tggaagctcaagaaagctgtgggaaaacatg 103
|||||||||||||||||||||||||||||||
Sbjct: 102 tggaagctcaagaaagctgtgggaaaacatg 132
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 gtcatgctattccacagctttcttgaactttctt 34
||||| || |||||||||||||||||||||||||
Sbjct: 2 gtcatacttttccacagctttcttgaactttctt 35
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 71 catggaagctcaagaaagctgtgggaaaacatgg 104
|||||||||||||||||||||||||| |||||||
Sbjct: 112 catggaagctcaagaaagctgtgggagaacatgg 145
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gtcatgctattccacagctttcttgaactt 30
|||||||| |||||||||||||||||||||
Sbjct: 2 gtcatgcttttccacagctttcttgaactt 31
>39878_aly-MIR396b:mirbase
Length = 188
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 75 gaagctcaagaaagctgtgggaaaacatg 103
|||||||||||||||||||||||||||||
Sbjct: 132 gaagctcaagaaagctgtgggaaaacatg 160
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaactttctt 34
|||||||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaactttctt 56
>39379_pab-MIR396a:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 77 agctcaagaaagctgtgggaaaacatgg 104
||||||||||||||||||||||||||||
Sbjct: 64 agctcaagaaagctgtgggaaaacatgg 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 catgctattccacagctttcttgaact 29
|||||| ||||||||||||||||||||
Sbjct: 9 catgctcttccacagctttcttgaact 35
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 gtcatgctattccacagctttcttgaactttcttg 35
|||||||| ||||||||||||||||||||| ||||
Sbjct: 2 gtcatgcttttccacagctttcttgaacttccttg 36
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 71 catggaagctcaagaaagctgtgggaaaacatgg 104
||||||||||||||||||| |||||| |||||||
Sbjct: 121 catggaagctcaagaaagccgtgggagaacatgg 154
>41212_ccl-MIR396:mirbase
Length = 277
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gtcatgctattccacagctttcttgaactt 30
|||||||| |||||||||||||||||||||
Sbjct: 134 gtcatgcttttccacagctttcttgaactt 163
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 71 catggaagctcaagaaagctgtgggaaaacatgg 104
||||| |||||||||||||||||||| |||||||
Sbjct: 227 catgggagctcaagaaagctgtgggagaacatgg 260
>40476_gma-MIR396d:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gtcatgctattccacagctttcttgaactt 30
|||||||| |||||||||||||||||||||
Sbjct: 2 gtcatgcttttccacagctttcttgaactt 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 gaagctcaagaaagctgtggga 96
||||||||||||||||||||||
Sbjct: 76 gaagctcaagaaagctgtggga 97
>40474_gma-MIR396b:mirbase
Length = 126
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gtcatgctattccacagctttcttgaactt 30
|||||||| |||||||||||||||||||||
Sbjct: 12 gtcatgcttttccacagctttcttgaactt 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 gaagctcaagaaagctgtggga 96
||||||||||||||||||||||
Sbjct: 86 gaagctcaagaaagctgtggga 107
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gtcatgctattccacagctttcttgaact 29
|||||||| ||||||||||||||||||||
Sbjct: 5 gtcatgcttttccacagctttcttgaact 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 gaagctcaagaaagctgtggga 96
||||||||||||||||||||||
Sbjct: 84 gaagctcaagaaagctgtggga 105
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 2 tcatgctattccacagctttcttgaactt 30
|||||||||||||| ||||||||||||||
Sbjct: 102 tcatgctattccacggctttcttgaactt 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 74 ggaagctcaagaaagctgtgggaaaacatgg 104
||||| ||||||||||||||| |||||||||
Sbjct: 33 ggaagttcaagaaagctgtggaaaaacatgg 3
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaactt 30
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactt 31
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 75 gaagctcaagaaagctgtgggaaaacatg 103
||||||||||||||| |||||||||||||
Sbjct: 139 gaagctcaagaaagccgtgggaaaacatg 167
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 catgctattccacagctttcttgaactt 30
|||||| |||||| ||||||||||||||
Sbjct: 14 catgcttttccacggctttcttgaactt 41
>40296_bna-MIR396a:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaactttctt 34
|||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactttctt 25
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 catgctattccacagctttcttgaactt 30
|||||| |||||||||||||||||||||
Sbjct: 7 catgcttttccacagctttcttgaactt 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 gaagctcaagaaagctgtgggaaaacatgg 104
|||| ||||||||||||||||||| |||||
Sbjct: 76 gaagttcaagaaagctgtgggaaaccatgg 105
>41241_csi-MIR396a:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaactttcttgaa 37
|||||||||||||||||||| |||||||
Sbjct: 21 ttccacagctttcttgaactgtcttgaa 48
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 catgctattccacagctttcttgaactt 30
|||| |||||||||||||||||||||||
Sbjct: 14 catgttattccacagctttcttgaactt 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 gtcatgctattccacagctttcttgaactt 30
|||||||| |||||| ||||||||||||||
Sbjct: 133 gtcatgcttttccacggctttcttgaactt 104
>40475_gma-MIR396c:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 atgctattccacagctttcttgaactt 30
||||| |||||||||||||||||||||
Sbjct: 15 atgcttttccacagctttcttgaactt 41
>39426_pta-MIR396:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 gtcatgctattccacagctttcttgaacttt 31
||||| || ||||||||||||||||||||||
Sbjct: 8 gtcatacttttccacagctttcttgaacttt 38
>41243_csi-MIR396c:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 gtcatgctattccacagctttcttgaactt 30
|||||| | |||||||||||||||||||||
Sbjct: 4 gtcatgtttttccacagctttcttgaactt 33
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 75 gaagctcaagaaagctgtgggaaaacatg 103
|||| ||||||||||||||| ||||||||
Sbjct: 34 gaagttcaagaaagctgtggaaaaacatg 6
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaacttt 31
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaacttt 22
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 tgctattccacagctttcttgaactt 30
|||| |||||||||||||||||||||
Sbjct: 1 tgcttttccacagctttcttgaactt 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 gaagctcaagaaagctgtggga 96
||||||||||||||||||||||
Sbjct: 67 gaagctcaagaaagctgtggga 88
>40379_rco-MIR396:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 tgctattccacagctttcttgaactt 30
|||| |||||||||||||||||||||
Sbjct: 1 tgcttttccacagctttcttgaactt 26
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 tcaagaaagctgtgggaaaacatg 103
||||||||||||||||| ||||||
Sbjct: 101 tcaagaaagctgtgggagaacatg 124
>42812_zma-MIR396f:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaactt 30
|||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaactt 22
>42811_zma-MIR396e:mirbase
Length = 166
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaactt 30
|||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaactt 22
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaactt 30
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactt 41
>42028_osa-MIR396c:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaactt 30
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactt 31
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaactt 30
|||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaactt 52
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41441_ptc-MIR396g:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 catgctattccacagctttcttgaactt 30
|||||| |||||| ||||||||||||||
Sbjct: 4 catgcttttccacggctttcttgaactt 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 aagctcaagaaagctgtgggaaaa 99
|||||||||||||| |||||||||
Sbjct: 140 aagctcaagaaagccgtgggaaaa 163
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41242_csi-MIR396b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 20 ttccacagctttcttgaact 39
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaact 26
>40473_gma-MIR396a:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40085_ath-MIR396a:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 ttccacagctttcttgaact 29
||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43
>39741_smo-MIR396:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 75 gaagctcaagaaagctgtgggaaa 98
|||| |||||||||||||||||||
Sbjct: 134 gaagttcaagaaagctgtgggaaa 157
