miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30328_ptr-mir-329-1:mirbase
Length = 79
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 2 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
Query: 62 taacctcttttccagtatc 80
|||||||||||||||||||
Sbjct: 61 taacctcttttccagtatc 79
>26801_cfa-mir-329b:mirbase
Length = 80
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 60
Query: 61 ttaacctcttttccagtatc 80
||||||||||||||||||||
Sbjct: 61 ttaacctcttttccagtatc 80
>28579_hsa-mir-329-2:mirbase
Length = 84
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3 ggtacctgaagagaggttttctgggtttctgtttctttattgaggacgaaacacacctgg 62
Query: 61 ttaacctcttttccagtatc 80
||||||||||||||||||||
Sbjct: 63 ttaacctcttttccagtatc 82
>30946_ppy-mir-329-1:mirbase
Length = 80
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 60
Query: 61 ttaacctcttttccagtatc 80
||||||||||||||||||||
Sbjct: 61 ttaacctcttttccagtatc 80
>33322_bta-mir-329b:mirbase
Length = 83
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 61
Query: 61 ttaacctcttttccagtatc 80
||||||||||||||||||||
Sbjct: 62 ttaacctcttttccagtatc 81
>33811_oar-mir-329b:mirbase
Length = 124
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 30 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 89
Query: 61 ttaacctcttttccagtatc 80
||||||||||||||||||||
Sbjct: 90 ttaacctcttttccagtatc 109
>33812_oar-mir-329b:mirbase
Length = 124
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 30 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 89
Query: 61 ttaacctcttttccagtatc 80
||||||||||||||||||||
Sbjct: 90 ttaacctcttttccagtatc 109
>27841_mml-mir-329-1:mirbase
Length = 84
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3 ggtacctgaagggaggttttctgggtttctgtttctttaatgaggatgaaacacacctgg 62
Query: 61 ttaacctcttttccagtatc 80
||||||||||||||||||||
Sbjct: 63 ttaacctcttttccagtatc 82
>30947_ppy-mir-329-2:mirbase
Length = 83
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 3 ggtacctgaagagaggttttctgggtttctgtttctttattgaggatgaaacacacctgg 62
Query: 61 ttaacctcttttccagtatc 80
||||||||||||||||||||
Sbjct: 63 ttaacctcttttccagtatc 82
>30329_ptr-mir-329-2:mirbase
Length = 79
Score = 141 bits (71), Expect = 8e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 2 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 61
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 1 gtacctgaagagaggttttctgggtttctgtttctttattgaggatgaaacacacctggt 60
Query: 62 taacctcttttccagtatc 80
|||||||||||||||||||
Sbjct: 61 taacctcttttccagtatc 79
>27125_eca-mir-329:mirbase
Length = 98
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 13 ggtacctgaagagaggttttctgggtttctgtttctttaatgaagatgaaacacacctag 72
Query: 61 ttaacctcttttccagtatc 80
||||||||||||||||||||
Sbjct: 73 ttaacctcttttccagtatc 92
>27842_mml-mir-329-2:mirbase
Length = 80
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
||||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||||
Sbjct: 1 ggtacctgaagggaggttttctgggtctctgtttctttactgaggatgaaacacacctgg 60
Query: 61 ttaacctcttttccagtatc 80
||||||||||||||||||||
Sbjct: 61 ttaacctcttttccagtatc 80
>33321_bta-mir-329a:mirbase
Length = 83
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
||||| ||| |||||||||||| ||| ||||||||||| ||||||| |||||||||||||
Sbjct: 3 ggtacttgaggagaggttttctaggtctctgtttctttcatgaggatgaaacacacctgg 62
Query: 61 ttaacctcttttccagtatc 80
||||||| ||||||||||||
Sbjct: 63 ttaaccttttttccagtatc 82
>33809_oar-mir-329a:mirbase
Length = 104
Score = 95.6 bits (48), Expect = 4e-21
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
||||| ||| |||||||||||| ||| || |||||||| ||||||| |||||||||||||
Sbjct: 11 ggtacttgaggagaggttttctaggtctccgtttctttcatgaggatgaaacacacctgg 70
Query: 61 ttaacctcttttccagtatc 80
||||||| ||||||||||||
Sbjct: 71 ttaaccttttttccagtatc 90
>33810_oar-mir-329a:mirbase
Length = 104
Score = 95.6 bits (48), Expect = 4e-21
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
||||| ||| |||||||||||| ||| || |||||||| ||||||| |||||||||||||
Sbjct: 11 ggtacttgaggagaggttttctaggtctccgtttctttcatgaggatgaaacacacctgg 70
Query: 61 ttaacctcttttccagtatc 80
||||||| ||||||||||||
Sbjct: 71 ttaaccttttttccagtatc 90
>26800_cfa-mir-329a:mirbase
Length = 60
Score = 87.7 bits (44), Expect = 1e-18
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 12 agaggttttctgggtttctgtttctttaatgaggacgaaacacacctggttaacctcttt 71
||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||
Sbjct: 1 agaggttttctgggtttctgtttctttcatgaggatgaaacacacccagttaacctcttt 60
>31996_mmu-mir-329:mirbase
Length = 97
Score = 79.8 bits (40), Expect = 3e-16
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
|||||| ||||||||||||||||||| ||||||||||| ||||| | |||||||||| |
Sbjct: 12 ggtaccggaagagaggttttctgggtctctgtttctttgatgagaatgaaacacacccag 71
Query: 61 ttaacctcttttccagtatc 80
|||||| |||| |||||||
Sbjct: 72 ctaacctttttttcagtatc 91
>32850_rno-mir-329:mirbase
Length = 97
Score = 79.8 bits (40), Expect = 3e-16
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 1 ggtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctgg 60
|||||| ||||||||||||||||||| ||||||||||| ||||| | |||||||||| |
Sbjct: 12 ggtaccggaagagaggttttctgggtctctgtttctttgatgagaatgaaacacacccag 71
Query: 61 ttaacctcttttccagtatc 80
|||||| |||| |||||||
Sbjct: 72 ctaacctttttttcagtatc 91
